Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5908

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
6,726,148	+				+0.9
6,726,149	-				-0.2
6,726,182	-				-0.1
6,726,182	-				+0.9
6,726,182	-				+0.9
6,726,192	-				-0.7
6,726,206	-				+0.9
6,726,206	-				+0.9
6,726,396	-				+0.9
6,726,422	+				-0.1
6,726,422	+				+0.9
6,726,422	+				+0.9
6,726,422	+				-0.1
6,726,422	+				-0.4
6,726,423	-				+0.9
6,726,489	-		Pf6N2E2_5906	0.26	+0.9
6,726,560	+		Pf6N2E2_5906	0.58	-0.1
6,726,560	+		Pf6N2E2_5906	0.58	-0.4
6,726,687	-				+0.9
6,726,700	+				+0.4
6,726,727	+				+1.3
6,726,778	+				-1.1
6,726,778	+				+0.9
6,726,784	-				+0.9
6,726,829	+				+0.9
6,726,829	+				-0.1
6,726,829	+				+0.9
6,726,829	+				-0.8
6,726,829	+				-2.2
6,726,830	-				+0.9
6,727,172	+		Pf6N2E2_5908	0.26	-0.7
6,727,172	+		Pf6N2E2_5908	0.26	-0.1
6,727,173	-		Pf6N2E2_5908	0.26	+0.9
6,727,173	-		Pf6N2E2_5908	0.26	+0.9
6,727,173	-		Pf6N2E2_5908	0.26	+0.9
6,727,173	-		Pf6N2E2_5908	0.26	+0.9
6,727,173	-		Pf6N2E2_5908	0.26	-0.1
6,727,174	+		Pf6N2E2_5908	0.26	-0.7
6,727,175	-		Pf6N2E2_5908	0.27	+0.9
6,727,175	-		Pf6N2E2_5908	0.27	-0.1
6,727,206	+		Pf6N2E2_5908	0.32	-0.1
6,727,207	-		Pf6N2E2_5908	0.33	-0.1
6,727,207	-		Pf6N2E2_5908	0.33	-0.1
6,727,243	+		Pf6N2E2_5908	0.39	-0.1
6,727,244	-		Pf6N2E2_5908	0.40	+0.9
6,727,244	-		Pf6N2E2_5908	0.40	-1.1
6,727,247	+		Pf6N2E2_5908	0.40	-1.0
6,727,247	+		Pf6N2E2_5908	0.40	+0.9
6,727,247	+		Pf6N2E2_5908	0.40	-1.7
6,727,247	+		Pf6N2E2_5908	0.40	-0.1
6,727,247	+		Pf6N2E2_5908	0.40	+0.9
6,727,248	-		Pf6N2E2_5908	0.40	-0.8
6,727,248	-		Pf6N2E2_5908	0.40	-0.1
6,727,248	-		Pf6N2E2_5908	0.40	-0.7
6,727,248	-		Pf6N2E2_5908	0.40	+0.9
6,727,320	-		Pf6N2E2_5908	0.54	-0.8
6,727,445	+		Pf6N2E2_5908	0.77	+0.9
6,727,446	-		Pf6N2E2_5908	0.78	-0.1
6,727,446	-		Pf6N2E2_5908	0.78	-0.1
6,727,562	+				+0.9
6,727,563	-				-0.1
6,727,563	-				+0.3
6,727,563	-				-0.7
6,727,563	-				+0.9
6,727,838	+		Pf6N2E2_5909	0.20	-0.1
6,727,838	+		Pf6N2E2_5909	0.20	+0.9
6,727,839	-		Pf6N2E2_5909	0.20	+0.9
6,727,909	+		Pf6N2E2_5909	0.26	+0.9
6,727,910	-		Pf6N2E2_5909	0.26	+0.7
6,727,942	+		Pf6N2E2_5909	0.28	+0.9
6,727,942	+		Pf6N2E2_5909	0.28	-0.1
6,727,942	+		Pf6N2E2_5909	0.28	+0.9
6,727,943	-		Pf6N2E2_5909	0.28	+0.9
6,728,089	+		Pf6N2E2_5909	0.39	+0.9
6,728,089	+		Pf6N2E2_5909	0.39	-0.1
6,728,089	+		Pf6N2E2_5909	0.39	+0.9
6,728,089	+		Pf6N2E2_5909	0.39	+0.9
6,728,090	-		Pf6N2E2_5909	0.39	-0.1
6,728,090	-		Pf6N2E2_5909	0.39	-0.7
6,728,090	-		Pf6N2E2_5909	0.39	+0.9
6,728,090	-		Pf6N2E2_5909	0.39	+0.1
6,728,090	-		Pf6N2E2_5909	0.39	+0.9
6,728,090	-		Pf6N2E2_5909	0.39	-0.1
6,728,116	+		Pf6N2E2_5909	0.41	-0.1
6,728,116	+		Pf6N2E2_5909	0.41	+0.9
6,728,116	+		Pf6N2E2_5909	0.41	+0.9
6,728,117	-		Pf6N2E2_5909	0.41	+0.9
6,728,117	-		Pf6N2E2_5909	0.41	-2.4
6,728,117	-		Pf6N2E2_5909	0.41	+0.9
6,728,203	+		Pf6N2E2_5909	0.48	+0.9
6,728,204	-		Pf6N2E2_5909	0.48	-0.7
6,728,204	-		Pf6N2E2_5909	0.48	-0.1
6,728,353	+		Pf6N2E2_5909	0.59	-0.3
6,728,374	+		Pf6N2E2_5909	0.61	+0.9