Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5366

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
6,163,776	+		Pf6N2E2_5365	0.40	-0.6
6,163,776	+		Pf6N2E2_5365	0.40	+1.0
6,163,776	+		Pf6N2E2_5365	0.40	-0.6
6,163,776	+		Pf6N2E2_5365	0.40	-0.3
6,163,776	+		Pf6N2E2_5365	0.40	-0.0
6,163,776	+		Pf6N2E2_5365	0.40	-0.0
6,163,777	-		Pf6N2E2_5365	0.40	-1.6
6,163,777	-		Pf6N2E2_5365	0.40	-0.0
6,163,890	+		Pf6N2E2_5365	0.49	-0.0
6,163,890	+		Pf6N2E2_5365	0.49	-0.6
6,163,890	+		Pf6N2E2_5365	0.49	+1.0
6,164,213	+		Pf6N2E2_5365	0.72	+1.0
6,164,446	-		Pf6N2E2_5365	0.89	+1.0
6,164,446	-		Pf6N2E2_5365	0.89	-1.0
6,164,502	+				-0.9
6,164,503	-				+1.0
6,164,503	-				+1.0
6,164,505	-				+1.0
6,164,505	-				+1.0
6,164,505	-				-1.6
6,164,505	-				-0.3
6,164,614	+				+1.0
6,164,615	-				-0.5
6,164,615	-				+1.0
6,164,615	-				+1.6
6,164,974	+		Pf6N2E2_5366	0.58	-1.3
6,164,974	+		Pf6N2E2_5366	0.58	+1.0
6,164,975	-		Pf6N2E2_5366	0.58	+1.0
6,164,975	-		Pf6N2E2_5366	0.58	+1.0
6,164,975	-		Pf6N2E2_5366	0.58	-0.0
6,164,975	-		Pf6N2E2_5366	0.58	-0.0
6,165,078	+		Pf6N2E2_5366	0.73	-1.8
6,165,079	-		Pf6N2E2_5366	0.73	+1.0
6,165,131	-		Pf6N2E2_5366	0.81	-1.0
6,165,189	-		Pf6N2E2_5366	0.89	-0.0
6,165,190	+		Pf6N2E2_5366	0.89	-1.0
6,165,190	+		Pf6N2E2_5366	0.89	-0.0
6,165,190	+		Pf6N2E2_5366	0.89	-0.6
6,165,220	+				-0.6
6,165,221	-				-0.2
6,165,221	-				+1.0
6,165,358	+				-0.8
6,165,358	+				+1.0
6,165,358	+				+2.0
6,165,358	+				+1.0
6,165,358	+				+1.0
6,165,358	+				+1.0
6,165,358	+				-0.0
6,165,358	+				-1.0
6,165,358	+				+0.4
6,165,358	+				+1.0
6,165,358	+				-0.0
6,165,358	+				-0.0
6,165,358	+				+1.0
6,165,358	+				+0.4
6,165,358	+				+1.0
6,165,358	+				-1.3
6,165,358	+				-0.6
6,165,359	-				-0.9
6,165,359	-				+1.0
6,165,359	-				-0.5
6,165,359	-				-0.0
6,165,359	-				-0.6
6,165,359	-				-0.6
6,165,359	-				-0.0
6,165,359	-				-0.0
6,165,359	-				-0.0
6,165,359	-				-0.7
6,165,359	-				+1.0
6,165,359	-				-0.0
6,165,359	-				-0.6
6,165,359	-				+1.0
6,165,359	-				+1.0
6,165,359	-				-1.6
6,165,359	-				+1.0
6,165,359	-				+0.6
6,165,360	+				-0.0
6,165,360	+				+1.0
6,165,360	+				-0.0
6,165,361	-				-1.0
6,165,361	-				+1.0
6,165,760	+		Pf6N2E2_5367	0.16	-1.3
6,165,760	+		Pf6N2E2_5367	0.16	-0.0
6,165,781	+		Pf6N2E2_5367	0.16	-0.0
6,165,781	+		Pf6N2E2_5367	0.16	+1.1
6,165,781	+		Pf6N2E2_5367	0.16	-0.2
6,165,781	+		Pf6N2E2_5367	0.16	+1.0
6,165,781	+		Pf6N2E2_5367	0.16	-0.7
6,165,782	-		Pf6N2E2_5367	0.16	+1.0
6,165,782	-		Pf6N2E2_5367	0.16	-0.6
6,165,782	-		Pf6N2E2_5367	0.16	+1.0
6,165,782	-		Pf6N2E2_5367	0.16	-1.0
6,165,782	-		Pf6N2E2_5367	0.16	-0.0
6,165,782	-		Pf6N2E2_5367	0.16	-0.1
6,165,782	-		Pf6N2E2_5367	0.16	-0.6
6,166,079	-		Pf6N2E2_5367	0.26	-0.0
6,166,085	-		Pf6N2E2_5367	0.26	+1.0
6,166,141	+		Pf6N2E2_5367	0.28	-0.0
6,166,141	+		Pf6N2E2_5367	0.28	+1.0
6,166,142	-		Pf6N2E2_5367	0.28	-1.3
6,166,195	+		Pf6N2E2_5367	0.30	-1.3
6,166,195	+		Pf6N2E2_5367	0.30	+1.0