Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4787

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
5,529,959	+				+0.4
5,529,959	+				+1.0
5,529,959	+				+0.4
5,529,959	+				+1.0
5,529,960	-				+1.0
5,530,082	+		Pf6N2E2_4786	0.11	-0.4
5,530,082	+		Pf6N2E2_4786	0.11	+1.0
5,530,083	-		Pf6N2E2_4786	0.11	+0.2
5,530,083	-		Pf6N2E2_4786	0.11	+1.0
5,530,083	-		Pf6N2E2_4786	0.11	+1.0
5,530,141	+		Pf6N2E2_4786	0.17	-0.0
5,530,141	+		Pf6N2E2_4786	0.17	+1.0
5,530,237	-		Pf6N2E2_4786	0.28	-0.0
5,530,247	-		Pf6N2E2_4786	0.29	-1.6
5,530,277	+		Pf6N2E2_4786	0.32	-0.2
5,530,277	+		Pf6N2E2_4786	0.32	-0.4
5,530,277	+		Pf6N2E2_4786	0.32	+1.0
5,530,277	+		Pf6N2E2_4786	0.32	+0.3
5,530,277	+		Pf6N2E2_4786	0.32	+1.0
5,530,278	-		Pf6N2E2_4786	0.32	+1.0
5,530,278	-		Pf6N2E2_4786	0.32	-0.0
5,530,278	-		Pf6N2E2_4786	0.32	-0.0
5,530,279	+		Pf6N2E2_4786	0.32	+1.0
5,530,279	+		Pf6N2E2_4786	0.32	+0.6
5,530,279	+		Pf6N2E2_4786	0.32	+1.0
5,530,279	+		Pf6N2E2_4786	0.32	-0.6
5,530,279	+		Pf6N2E2_4786	0.32	-0.6
5,530,279	+		Pf6N2E2_4786	0.32	-0.0
5,530,279	+		Pf6N2E2_4786	0.32	-0.0
5,530,279	+		Pf6N2E2_4786	0.32	-0.0
5,530,279	+		Pf6N2E2_4786	0.32	-0.0
5,530,279	+		Pf6N2E2_4786	0.32	-0.0
5,530,279	+		Pf6N2E2_4786	0.32	-0.0
5,530,279	+		Pf6N2E2_4786	0.32	-0.6
5,530,279	+		Pf6N2E2_4786	0.32	-0.6
5,530,279	+		Pf6N2E2_4786	0.32	-0.6
5,530,329	+		Pf6N2E2_4786	0.38	-0.0
5,530,330	-		Pf6N2E2_4786	0.38	-0.4
5,530,330	-		Pf6N2E2_4786	0.38	-0.6
5,530,330	-		Pf6N2E2_4786	0.38	-0.0
5,530,341	+		Pf6N2E2_4786	0.39	-0.0
5,530,372	+		Pf6N2E2_4786	0.42	-0.7
5,530,372	+		Pf6N2E2_4786	0.42	-0.0
5,530,372	+		Pf6N2E2_4786	0.42	-2.0
5,530,373	-		Pf6N2E2_4786	0.43	-0.0
5,530,373	-		Pf6N2E2_4786	0.43	+1.0
5,530,397	+		Pf6N2E2_4786	0.45	-0.0
5,530,397	+		Pf6N2E2_4786	0.45	-0.0
5,530,398	-		Pf6N2E2_4786	0.45	+1.0
5,530,413	+		Pf6N2E2_4786	0.47	+0.4
5,530,413	+		Pf6N2E2_4786	0.47	-1.0
5,530,414	-		Pf6N2E2_4786	0.47	-0.0
5,530,414	-		Pf6N2E2_4786	0.47	+1.0
5,530,416	+		Pf6N2E2_4786	0.47	+1.0
5,530,416	+		Pf6N2E2_4786	0.47	-0.0
5,530,417	-		Pf6N2E2_4786	0.47	+1.0
5,530,607	+		Pf6N2E2_4786	0.68	+1.0
5,530,607	+		Pf6N2E2_4786	0.68	+1.0
5,530,607	+		Pf6N2E2_4786	0.68	-0.0
5,530,608	-		Pf6N2E2_4786	0.68	+1.0
5,530,608	-		Pf6N2E2_4786	0.68	-0.0
5,530,608	-		Pf6N2E2_4786	0.68	-0.6
5,530,612	+		Pf6N2E2_4786	0.68	+1.0
5,530,613	-		Pf6N2E2_4786	0.68	-0.0
5,530,613	-		Pf6N2E2_4786	0.68	+1.0
5,530,613	-		Pf6N2E2_4786	0.68	+0.2
5,530,643	+		Pf6N2E2_4786	0.72	+1.2
5,530,644	-		Pf6N2E2_4786	0.72	+1.0
5,530,663	+		Pf6N2E2_4786	0.74	-2.3
5,530,663	+		Pf6N2E2_4786	0.74	+1.0
5,530,664	-		Pf6N2E2_4786	0.74	-1.0
5,530,664	-		Pf6N2E2_4786	0.74	+1.4
5,530,664	-		Pf6N2E2_4786	0.74	-0.0
5,530,775	+		Pf6N2E2_4786	0.86	-1.5
5,530,775	+		Pf6N2E2_4786	0.86	-0.6
5,530,775	+		Pf6N2E2_4786	0.86	+2.0
5,530,776	-		Pf6N2E2_4786	0.86	+1.0
5,530,776	-		Pf6N2E2_4786	0.86	+1.0
5,530,776	-		Pf6N2E2_4786	0.86	+1.0
5,530,776	-		Pf6N2E2_4786	0.86	+1.0
5,530,776	-		Pf6N2E2_4786	0.86	-0.0
5,530,776	-		Pf6N2E2_4786	0.86	-0.6
5,530,776	-		Pf6N2E2_4786	0.86	-0.0
5,530,799	+		Pf6N2E2_4786	0.88	+1.0
5,530,799	+		Pf6N2E2_4786	0.88	-0.0
5,530,800	-		Pf6N2E2_4786	0.89	+1.0
5,530,800	-		Pf6N2E2_4786	0.89	+1.0
5,530,800	-		Pf6N2E2_4786	0.89	-0.0
5,530,800	-		Pf6N2E2_4786	0.89	-0.0
5,530,800	-		Pf6N2E2_4786	0.89	-0.6
5,530,800	-		Pf6N2E2_4786	0.89	-1.3
5,530,800	-		Pf6N2E2_4786	0.89	-0.0
5,530,800	-		Pf6N2E2_4786	0.89	-0.0
5,530,814	+				-0.6
5,530,814	+				+1.0
5,530,814	+				+1.0
5,530,814	+				+1.0
5,530,814	+				-0.0
5,530,814	+				+0.4
5,530,814	+				+1.0
5,530,814	+				-0.0
5,530,814	+				+1.0
5,530,815	-				+1.0
5,530,883	-				-0.0
5,530,883	-				-0.0
5,530,883	-				-0.6
5,530,883	-				-1.3
5,530,905	+				-0.6
5,530,905	+				-0.0
5,530,905	+				+1.0
5,530,906	-				-0.0
5,531,132	-		Pf6N2E2_4787	0.19	-1.0
5,531,132	-		Pf6N2E2_4787	0.19	-0.7
5,531,230	-		Pf6N2E2_4787	0.27	+1.0
5,531,254	+		Pf6N2E2_4787	0.29	+1.0
5,531,255	-		Pf6N2E2_4787	0.29	+1.0
5,531,278	+		Pf6N2E2_4787	0.31	-0.7
5,531,278	+		Pf6N2E2_4787	0.31	-0.8
5,531,279	-		Pf6N2E2_4787	0.31	+1.0
5,531,279	-		Pf6N2E2_4787	0.31	-0.7
5,531,281	+		Pf6N2E2_4787	0.32	-0.6
5,531,281	+		Pf6N2E2_4787	0.32	-0.0
5,531,281	+		Pf6N2E2_4787	0.32	-1.0
5,531,281	+		Pf6N2E2_4787	0.32	-0.0
5,531,281	+		Pf6N2E2_4787	0.32	-0.6
5,531,281	+		Pf6N2E2_4787	0.32	-0.0
5,531,281	+		Pf6N2E2_4787	0.32	-0.0
5,531,281	+		Pf6N2E2_4787	0.32	-0.6
5,531,282	-		Pf6N2E2_4787	0.32	-0.0
5,531,282	-		Pf6N2E2_4787	0.32	+1.0
5,531,282	-		Pf6N2E2_4787	0.32	-0.0
5,531,282	-		Pf6N2E2_4787	0.32	-1.8
5,531,282	-		Pf6N2E2_4787	0.32	+1.0
5,531,293	+		Pf6N2E2_4787	0.33	+1.0
5,531,293	+		Pf6N2E2_4787	0.33	+1.0
5,531,293	+		Pf6N2E2_4787	0.33	+1.0
5,531,293	+		Pf6N2E2_4787	0.33	+1.0
5,531,293	+		Pf6N2E2_4787	0.33	+1.0
5,531,293	+		Pf6N2E2_4787	0.33	+1.0
5,531,293	+		Pf6N2E2_4787	0.33	+0.6
5,531,294	-		Pf6N2E2_4787	0.33	+1.0
5,531,294	-		Pf6N2E2_4787	0.33	+0.1
5,531,294	-		Pf6N2E2_4787	0.33	-0.6
5,531,296	-		Pf6N2E2_4787	0.33	+1.0
5,531,296	-		Pf6N2E2_4787	0.33	-0.6
5,531,321	+		Pf6N2E2_4787	0.35	+1.0
5,531,348	-		Pf6N2E2_4787	0.37	-0.7
5,531,348	-		Pf6N2E2_4787	0.37	-0.0
5,531,348	-		Pf6N2E2_4787	0.37	+1.0
5,531,426	+		Pf6N2E2_4787	0.44	+1.0
5,531,426	+		Pf6N2E2_4787	0.44	+1.0
5,531,427	-		Pf6N2E2_4787	0.44	-0.0
5,531,427	-		Pf6N2E2_4787	0.44	+0.8
5,531,500	+		Pf6N2E2_4787	0.50	+1.0
5,531,617	+		Pf6N2E2_4787	0.59	-0.0
5,531,617	+		Pf6N2E2_4787	0.59	-2.1
5,531,617	+		Pf6N2E2_4787	0.59	+1.0
5,531,617	+		Pf6N2E2_4787	0.59	-0.2
5,531,618	-		Pf6N2E2_4787	0.60	+1.0
5,531,618	-		Pf6N2E2_4787	0.60	-2.2
5,531,618	-		Pf6N2E2_4787	0.60	-0.0
5,531,618	-		Pf6N2E2_4787	0.60	-0.0
5,531,640	+		Pf6N2E2_4787	0.61	-1.3
5,531,640	+		Pf6N2E2_4787	0.61	-0.0
5,531,640	+		Pf6N2E2_4787	0.61	+1.2
5,531,641	-		Pf6N2E2_4787	0.61	+0.3
5,531,702	+		Pf6N2E2_4787	0.67	+0.6
5,531,703	-		Pf6N2E2_4787	0.67	-0.6
5,531,706	-		Pf6N2E2_4787	0.67	-0.7
5,531,740	+		Pf6N2E2_4787	0.70	-0.6
5,531,741	-		Pf6N2E2_4787	0.70	+1.0
5,531,741	-		Pf6N2E2_4787	0.70	+1.0
5,531,744	+		Pf6N2E2_4787	0.70	+1.0
5,531,745	-		Pf6N2E2_4787	0.70	+1.0
5,531,807	+		Pf6N2E2_4787	0.75	+1.0
5,531,807	+		Pf6N2E2_4787	0.75	+1.0
5,531,807	+		Pf6N2E2_4787	0.75	+1.0
5,531,807	+		Pf6N2E2_4787	0.75	+1.0
5,531,808	-		Pf6N2E2_4787	0.75	+1.0
5,531,808	-		Pf6N2E2_4787	0.75	+1.0
5,531,808	-		Pf6N2E2_4787	0.75	+1.0
5,531,808	-		Pf6N2E2_4787	0.75	-0.0
5,531,808	-		Pf6N2E2_4787	0.75	-0.0
5,531,811	+		Pf6N2E2_4787	0.76	-0.0
5,531,824	+		Pf6N2E2_4787	0.77	-1.0
5,531,860	-		Pf6N2E2_4787	0.80	-0.0
5,531,895	+		Pf6N2E2_4787	0.83	-0.0
5,531,895	+		Pf6N2E2_4787	0.83	-0.3
5,531,895	+		Pf6N2E2_4787	0.83	-0.6
5,531,895	+		Pf6N2E2_4787	0.83	-0.6
5,531,895	+		Pf6N2E2_4787	0.83	-0.9
5,531,895	+		Pf6N2E2_4787	0.83	-0.6
5,531,896	-		Pf6N2E2_4787	0.83	-0.5
5,531,896	-		Pf6N2E2_4787	0.83	+1.0
5,531,896	-		Pf6N2E2_4787	0.83	-0.1
5,531,896	-		Pf6N2E2_4787	0.83	-0.7
5,531,896	-		Pf6N2E2_4787	0.83	-0.0
5,531,908	+		Pf6N2E2_4787	0.84	-0.3
5,531,908	+		Pf6N2E2_4787	0.84	-0.2
5,531,909	-		Pf6N2E2_4787	0.84	+1.6
5,531,909	-		Pf6N2E2_4787	0.84	-0.7
5,531,911	+		Pf6N2E2_4787	0.84	+0.7
5,531,918	+		Pf6N2E2_4787	0.84	+0.3
5,531,919	-		Pf6N2E2_4787	0.85	+1.0
5,531,919	-		Pf6N2E2_4787	0.85	+1.0
5,531,976	+		Pf6N2E2_4787	0.89	-0.0
5,531,977	-		Pf6N2E2_4787	0.89	+1.0
5,532,082	+				+1.0
5,532,082	+				+1.0
5,532,082	+				-1.4
5,532,082	+				-0.7
5,532,083	-				-0.6
5,532,083	-				-0.6
5,532,083	-				+1.0
5,532,130	+				+1.0
5,532,130	+				-1.6
5,532,151	+				-0.0
5,532,158	+				+1.0
5,532,158	+				+1.0
5,532,158	+				-1.0
5,532,158	+				+0.4
5,532,158	+				-0.6
5,532,159	-				+1.0
5,532,159	-				+1.0
5,532,159	-				-0.0
5,532,159	-				+0.6
5,532,159	-				+1.0
5,532,159	-				-0.8
5,532,196	+				+1.0
5,532,197	-				+0.1
5,532,206	+				-0.4
5,532,272	+				+1.0
5,532,272	+				-0.8
5,532,273	-				+1.0
5,532,305	+				+0.3
5,532,305	+				+1.0
5,532,306	-				-1.3
5,532,306	-				-0.4
5,532,306	-				-0.0
5,532,306	-				-0.0
5,532,306	-				-0.2
5,532,306	-				+0.3
5,532,306	-				-0.0
5,532,306	-				+1.0
5,532,306	-				-0.2
5,532,318	+				-1.0
5,532,318	+				+1.0
5,532,318	+				-0.0
5,532,318	+				+1.0
5,532,318	+				-0.6
5,532,318	+				-0.2
5,532,318	+				+1.0
5,532,318	+				-0.0
5,532,318	+				+1.0
5,532,318	+				-0.6
5,532,318	+				-0.2
5,532,319	-				+1.0
5,532,319	-				-0.0
5,532,319	-				+1.0
5,532,319	-				-1.8
5,532,319	-				-0.6
5,532,319	-				+1.0
5,532,319	-				-0.6
5,532,323	+				+1.0
5,532,323	+				-1.0
5,532,324	-				+1.0
5,532,324	-				-0.5
5,532,380	+				+1.0
5,532,381	-				-0.0
5,532,381	-				+0.8
5,532,381	-				+1.0
5,532,437	+				+1.9
5,532,462	+				+1.0
5,532,462	+				+1.0
5,532,463	-				-0.4
5,532,470	+				-0.0
5,532,564	+				+1.0
5,532,565	-				-0.4
5,532,580	+				-0.0
5,532,580	+				-0.7
5,532,580	+				-0.6
5,532,580	+				-1.2
5,532,580	+				-0.0
5,532,580	+				-0.3
5,532,581	-				+1.0
5,532,581	-				-0.8
5,532,581	-				+1.0
5,532,581	-				-0.5
5,532,581	-				-0.6
5,532,763	-				-2.5
5,532,763	-				+1.0
5,532,795	+				-0.8
5,532,795	+				+1.0
5,532,840	+				+1.0
5,532,840	+				+2.0
5,532,840	+				-0.0
5,532,840	+				+1.0
5,532,841	-				+1.0
5,532,841	-				-0.7
5,532,841	-				+0.6
5,532,841	-				-0.0
5,532,841	-				+1.0
5,532,843	+				-0.3
5,532,844	-				+1.0
5,532,844	-				+1.0
5,532,844	-				+1.0
5,532,844	-				-0.0
5,532,930	+				+1.0
5,532,931	-				+1.0
5,532,931	-				-2.0
5,532,931	-				+1.0
5,532,964	-				-0.6
5,532,964	-				-0.0
5,532,996	+				-0.6
5,532,997	-				+0.3
5,532,997	-				+1.0
5,532,997	-				-0.0
5,532,997	-				+1.0
5,533,064	+				+1.0
5,533,065	-				-2.3
5,533,086	+				-0.2
5,533,087	-				-0.7
5,533,090	+				+1.0
5,533,090	+				+1.0
5,533,091	-				-1.0