Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3664

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
4,264,426	+				-0.0
4,264,427	-				-2.4
4,264,427	-				-4.1
4,264,475	-				+1.0
4,264,475	-				+1.0
4,264,495	+		Pf6N2E2_3663	0.11	+1.0
4,264,496	-		Pf6N2E2_3663	0.12	+1.0
4,264,667	+		Pf6N2E2_3663	0.30	-3.6
4,264,668	-		Pf6N2E2_3663	0.31	-2.0
4,264,668	-		Pf6N2E2_3663	0.31	-2.8
4,264,669	+		Pf6N2E2_3663	0.31	+1.0
4,264,670	-		Pf6N2E2_3663	0.31	-0.0
4,264,670	-		Pf6N2E2_3663	0.31	-2.1
4,264,670	-		Pf6N2E2_3663	0.31	+1.0
4,264,670	-		Pf6N2E2_3663	0.31	-2.0
4,264,670	-		Pf6N2E2_3663	0.31	-0.0
4,264,670	-		Pf6N2E2_3663	0.31	-0.6
4,264,768	+		Pf6N2E2_3663	0.42	-5.2
4,264,844	-		Pf6N2E2_3663	0.50	-2.5
4,264,941	-		Pf6N2E2_3663	0.61	-0.6
4,265,032	+		Pf6N2E2_3663	0.71	+1.0
4,265,032	+		Pf6N2E2_3663	0.71	+1.0
4,265,033	-		Pf6N2E2_3663	0.71	-0.6
4,265,033	-		Pf6N2E2_3663	0.71	-3.8
4,265,033	-		Pf6N2E2_3663	0.71	-0.0
4,265,033	-		Pf6N2E2_3663	0.71	-3.6
4,265,033	-		Pf6N2E2_3663	0.71	-2.5
4,265,033	-		Pf6N2E2_3663	0.71	-2.0
4,265,033	-		Pf6N2E2_3663	0.71	+1.0
4,265,033	-		Pf6N2E2_3663	0.71	+1.0
4,265,033	-		Pf6N2E2_3663	0.71	-1.6
4,265,033	-		Pf6N2E2_3663	0.71	+1.0
4,265,063	+		Pf6N2E2_3663	0.74	-3.6
4,265,252	-				-2.4
4,265,252	-				-3.1
4,265,255	+				-3.3
4,265,255	+				+0.1
4,265,256	-				-2.5
4,265,256	-				+1.0
4,265,257	+				+1.0
4,265,257	+				-0.0
4,265,257	+				-3.1
4,265,258	-				-2.8
4,265,258	-				-2.3
4,265,258	-				-2.5
4,265,258	-				-2.5
4,265,258	-				-2.2
4,265,295	-				-1.1
4,265,478	-		Pf6N2E2_3664	0.11	-0.0
4,265,481	-		Pf6N2E2_3664	0.11	-0.9
4,265,906	+		Pf6N2E2_3664	0.35	-3.6
4,265,922	-		Pf6N2E2_3664	0.36	+1.0
4,265,969	+		Pf6N2E2_3664	0.39	-3.7
4,265,969	+		Pf6N2E2_3664	0.39	-5.0
4,265,969	+		Pf6N2E2_3664	0.39	+1.0
4,265,970	-		Pf6N2E2_3664	0.39	-0.6
4,265,970	-		Pf6N2E2_3664	0.39	-2.2
4,265,970	-		Pf6N2E2_3664	0.39	+1.0
4,265,970	-		Pf6N2E2_3664	0.39	-0.6
4,265,970	-		Pf6N2E2_3664	0.39	-1.3
4,265,970	-		Pf6N2E2_3664	0.39	-1.3
4,265,970	-		Pf6N2E2_3664	0.39	-0.0
4,265,970	-		Pf6N2E2_3664	0.39	-2.7
4,265,970	-		Pf6N2E2_3664	0.39	+1.0
4,265,970	-		Pf6N2E2_3664	0.39	-1.1
4,266,131	+		Pf6N2E2_3664	0.48	+1.0
4,266,131	+		Pf6N2E2_3664	0.48	+1.0
4,266,132	-		Pf6N2E2_3664	0.48	-0.0
4,266,198	-				-1.2
4,266,198	-		Pf6N2E2_3664	0.52	-2.1
4,266,198	-		Pf6N2E2_3664	0.52	+0.9
4,266,198	-		Pf6N2E2_3664	0.52	-2.1
4,266,198	-		Pf6N2E2_3664	0.52	+1.0
4,266,264	-		Pf6N2E2_3664	0.56	+1.0
4,266,264	-		Pf6N2E2_3664	0.56	-0.0
4,266,264	-		Pf6N2E2_3664	0.56	-2.7
4,266,264	-		Pf6N2E2_3664	0.56	+1.0
4,266,285	+		Pf6N2E2_3664	0.57	+1.0
4,266,286	-		Pf6N2E2_3664	0.57	-2.8
4,266,286	-		Pf6N2E2_3664	0.57	+1.0
4,266,288	-		Pf6N2E2_3664	0.57	-2.4
4,266,371	+		Pf6N2E2_3664	0.62	+1.0
4,266,372	-		Pf6N2E2_3664	0.62	-1.3
4,266,372	-		Pf6N2E2_3664	0.62	-0.0
4,266,372	-		Pf6N2E2_3664	0.62	-2.8
4,266,720	-		Pf6N2E2_3664	0.82	-2.5
4,266,785	+		Pf6N2E2_3664	0.86	-2.8
4,266,786	-		Pf6N2E2_3664	0.86	-3.2
4,266,929	-				-2.5
4,266,975	-				-2.7
4,266,975	-				+1.0
4,266,975	-				-0.6
4,266,975	-				-3.2
4,266,975	-				-2.6
4,266,975	-				-0.0
4,266,975	-				-3.7
4,267,043	+				-0.0
4,267,044	-				+1.0
4,267,051	+				+1.0
4,267,052	-				+1.0
4,267,052	-				-1.0
4,267,052	-				+1.0
4,267,052	-				-1.7
4,267,052	-				-1.0
4,267,052	-				-3.2
4,267,052	-				-0.6
4,267,121	-				-0.0
4,267,121	-				-0.0
4,267,135	+				-0.0
4,267,135	+				-1.9
4,267,135	+				-0.0
4,267,141	-				-1.2
4,267,141	-				+1.0
4,267,153	-				+1.0
4,267,186	+				+1.0
4,267,186	+				+0.0
4,267,187	-				-0.8
4,267,193	+				-0.6
4,267,193	+				+1.0
4,267,242	-				+1.0
4,267,343	+				-1.3
4,267,344	-				-0.6
4,267,384	-				+1.0
4,267,395	+				+1.0
4,267,980	-		Pf6N2E2_3665	0.40	-2.6