Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3481

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
4,061,767	+				+1.0
4,061,767	+				-0.5
4,061,767	+				+0.2
4,061,767	+				-1.4
4,061,768	-				-0.0
4,061,809	+				-2.0
4,061,809	+				-0.6
4,061,809	+				+1.0
4,061,809	+				-0.8
4,061,809	+				-0.0
4,061,810	-				+1.0
4,062,134	-		Pf6N2E2_3480	0.44	+0.1
4,062,544	+				+0.4
4,062,544	+				+0.2
4,062,544	+				-0.0
4,062,544	+				+1.0
4,062,545	-				-0.0
4,062,545	-				-0.0
4,062,545	-				-0.0
4,062,545	-				-1.0
4,062,545	-				+1.0
4,062,545	-				-0.6
4,062,545	-				-1.5
4,062,545	-				+1.0
4,062,545	-				+1.0
4,062,545	-				-0.8
4,062,545	-				-1.4
4,062,572	-				+1.0
4,062,572	-				-0.6
4,062,595	+				+1.0
4,062,598	+				+1.0
4,062,598	+				-0.0
4,062,598	+				+1.0
4,062,598	+				+1.0
4,062,598	+				-0.6
4,062,598	+				-0.0
4,062,598	+				+0.4
4,062,598	+				+1.0
4,062,598	+				-0.0
4,062,598	+				+1.0
4,062,599	-				-0.4
4,062,599	-				-0.8
4,062,599	-				-0.6
4,062,599	-				-0.6
4,062,599	-				-0.6
4,062,599	-				-0.6
4,062,599	-				-0.0
4,062,599	-				+1.0
4,062,600	+				-0.3
4,062,600	+				-0.6
4,062,600	+				-0.0
4,062,600	+				+1.0
4,062,600	+				-0.6
4,062,600	+				-1.8
4,062,601	-				-0.4
4,062,601	-				-0.6
4,062,685	+				+1.0
4,062,777	+		Pf6N2E2_3481	0.10	+1.0
4,062,777	+		Pf6N2E2_3481	0.10	-0.0
4,062,777	+		Pf6N2E2_3481	0.10	-0.7
4,062,777	+		Pf6N2E2_3481	0.10	-0.0
4,062,777	+		Pf6N2E2_3481	0.10	-0.6
4,062,778	-		Pf6N2E2_3481	0.10	-0.6
4,062,778	-		Pf6N2E2_3481	0.10	+1.0
4,062,778	-		Pf6N2E2_3481	0.10	-0.0
4,062,778	-		Pf6N2E2_3481	0.10	-0.5
4,062,778	-		Pf6N2E2_3481	0.10	+1.0
4,062,778	-		Pf6N2E2_3481	0.10	+0.1
4,062,778	-		Pf6N2E2_3481	0.10	+1.0
4,062,893	+		Pf6N2E2_3481	0.22	-0.6
4,062,896	-		Pf6N2E2_3481	0.23	-0.0
4,063,036	+		Pf6N2E2_3481	0.38	-0.0
4,063,036	+		Pf6N2E2_3481	0.38	-0.8
4,063,036	+		Pf6N2E2_3481	0.38	+0.6
4,063,036	+		Pf6N2E2_3481	0.38	-0.0
4,063,036	+		Pf6N2E2_3481	0.38	+1.0
4,063,036	+		Pf6N2E2_3481	0.38	-0.0
4,063,037	-		Pf6N2E2_3481	0.38	+1.0
4,063,037	-		Pf6N2E2_3481	0.38	-0.0
4,063,037	-		Pf6N2E2_3481	0.38	+0.9
4,063,037	-		Pf6N2E2_3481	0.38	-0.0
4,063,037	-		Pf6N2E2_3481	0.38	-0.0
4,063,037	-		Pf6N2E2_3481	0.38	-0.6
4,063,037	-		Pf6N2E2_3481	0.38	+0.1
4,063,037	-		Pf6N2E2_3481	0.38	-0.6
4,063,037	-		Pf6N2E2_3481	0.38	-0.5
4,063,099	+		Pf6N2E2_3481	0.45	+1.0
4,063,099	+		Pf6N2E2_3481	0.45	-0.0
4,063,411	+		Pf6N2E2_3481	0.78	+1.0
4,063,683	-				-0.0
4,063,686	+				+1.0
4,063,686	+				-0.6
4,063,686	+				-1.5
4,063,686	+				-0.6
4,063,686	+				+1.0
4,063,686	+				+1.0
4,063,686	+				+2.0
4,063,686	+				+1.0
4,063,687	-				+1.0
4,063,687	-				-0.0
4,063,687	-				-0.0
4,063,687	-				+1.0
4,063,687	-				+1.0
4,063,687	-				+1.0
4,063,687	-				-0.4
4,063,687	-				-0.0
4,063,742	+				-0.5
4,063,742	+				-1.4
4,063,742	+				-0.0
4,063,742	+				-2.7
4,063,742	+				+1.0
4,063,742	+				+1.5
4,063,742	+				-0.6
4,063,742	+				-0.0
4,063,743	-				-0.0
4,063,745	+				+1.0
4,063,745	+				-0.6
4,063,745	+				-0.0
4,063,745	+				-0.0
4,063,745	+				-0.0
4,063,745	+				-0.8
4,063,746	-				+0.4
4,063,760	-				-0.0
4,063,760	-				-0.0
4,063,794	+				+1.0
4,063,795	-				-0.6
4,063,795	-				-0.0
4,063,843	+		Pf6N2E2_3482	0.14	+1.0
4,063,843	+		Pf6N2E2_3482	0.14	-0.6
4,063,844	-		Pf6N2E2_3482	0.15	-0.6
4,063,844	-		Pf6N2E2_3482	0.15	-0.2
4,063,991	+		Pf6N2E2_3482	0.29	-0.4
4,063,991	+		Pf6N2E2_3482	0.29	-0.2
4,064,134	-		Pf6N2E2_3482	0.42	-0.0
4,064,134	-		Pf6N2E2_3482	0.42	-0.0
4,064,490	+		Pf6N2E2_3482	0.76	-1.4
4,064,490	+		Pf6N2E2_3482	0.76	-0.0
4,064,491	-		Pf6N2E2_3482	0.76	-1.0
4,064,491	-		Pf6N2E2_3482	0.76	-1.9
4,064,491	-		Pf6N2E2_3482	0.76	-0.9
4,064,537	+		Pf6N2E2_3482	0.81	+1.0
4,064,537	+		Pf6N2E2_3482	0.81	-0.0
4,064,537	+		Pf6N2E2_3482	0.81	-0.6
4,064,538	-		Pf6N2E2_3482	0.81	-0.0
4,064,538	-		Pf6N2E2_3482	0.81	-0.8
4,064,538	-		Pf6N2E2_3482	0.81	-0.0
4,064,538	-		Pf6N2E2_3482	0.81	-0.0