Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3445

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
4,013,587	+		Pf6N2E2_3444	0.12	-0.0
4,013,587	+		Pf6N2E2_3444	0.12	+1.0
4,013,587	+		Pf6N2E2_3444	0.12	+1.0
4,013,587	+		Pf6N2E2_3444	0.12	-0.0
4,013,588	-		Pf6N2E2_3444	0.12	-0.5
4,013,588	-		Pf6N2E2_3444	0.12	-0.7
4,013,588	-		Pf6N2E2_3444	0.12	-0.9
4,013,588	-		Pf6N2E2_3444	0.12	+1.0
4,013,588	-		Pf6N2E2_3444	0.12	-0.8
4,013,588	-		Pf6N2E2_3444	0.12	-0.5
4,013,588	-		Pf6N2E2_3444	0.12	-0.0
4,013,719	+		Pf6N2E2_3444	0.27	-0.6
4,013,719	+		Pf6N2E2_3444	0.27	-0.6
4,013,758	+		Pf6N2E2_3444	0.31	-0.0
4,013,758	+		Pf6N2E2_3444	0.31	+1.0
4,013,758	+		Pf6N2E2_3444	0.31	+1.0
4,013,759	-		Pf6N2E2_3444	0.31	-0.5
4,013,761	-		Pf6N2E2_3444	0.32	-0.0
4,013,837	+		Pf6N2E2_3444	0.40	-0.4
4,013,902	+		Pf6N2E2_3444	0.47	+0.2
4,013,902	+		Pf6N2E2_3444	0.47	-0.0
4,013,903	-		Pf6N2E2_3444	0.48	+1.0
4,013,903	-		Pf6N2E2_3444	0.48	+1.0
4,013,903	-		Pf6N2E2_3444	0.48	+1.0
4,014,022	+		Pf6N2E2_3444	0.61	+1.0
4,014,023	-		Pf6N2E2_3444	0.61	-0.6
4,014,023	-		Pf6N2E2_3444	0.61	+1.0
4,014,133	-		Pf6N2E2_3444	0.73	+1.0
4,014,363	+				+1.0
4,014,363	+				-0.0
4,014,363	+				-0.0
4,014,363	+				+0.3
4,014,364	-				-0.0
4,014,364	-				-0.2
4,014,364	-				-1.6
4,014,364	-				-0.6
4,014,364	-				+1.0
4,014,568	+		Pf6N2E2_3445	0.10	-1.0
4,014,571	+		Pf6N2E2_3445	0.11	-0.3
4,014,571	+		Pf6N2E2_3445	0.11	+1.0
4,014,572	-		Pf6N2E2_3445	0.11	-0.4
4,014,871	+		Pf6N2E2_3445	0.44	-0.0
4,014,902	+		Pf6N2E2_3445	0.47	-0.0
4,014,902	+		Pf6N2E2_3445	0.47	+0.5
4,015,014	+		Pf6N2E2_3445	0.59	-0.0
4,015,015	-		Pf6N2E2_3445	0.59	-0.0
4,015,192	+		Pf6N2E2_3445	0.79	-0.8
4,015,192	+		Pf6N2E2_3445	0.79	+1.0
4,015,192	+		Pf6N2E2_3445	0.79	-0.5
4,015,192	+		Pf6N2E2_3445	0.79	-0.0
4,015,193	-		Pf6N2E2_3445	0.79	-0.0
4,015,193	-		Pf6N2E2_3445	0.79	+1.0
4,015,521	+				+1.0
4,015,521	+				-1.8
4,015,521	+				+1.0
4,015,521	+				-0.0
4,015,521	+				-0.6
4,015,521	+				-0.0
4,015,521	+				+1.0
4,015,521	+				-0.1
4,015,521	+				+1.5
4,015,521	+				-0.6
4,015,522	-				+1.0
4,015,522	-				-0.0
4,015,522	-				+1.0
4,015,522	-				+3.0
4,015,522	-				+1.0
4,015,522	-				-0.4
4,015,522	-				+1.0
4,015,558	+				-0.0
4,015,559	-				-1.0
4,015,619	+				+1.0
4,015,727	+		Pf6N2E2_3446	0.25	+1.0
4,015,727	+		Pf6N2E2_3446	0.25	-0.0
4,015,728	-		Pf6N2E2_3446	0.25	+0.4
4,015,728	-		Pf6N2E2_3446	0.25	-0.6
4,015,728	-		Pf6N2E2_3446	0.25	+1.0
4,015,814	+		Pf6N2E2_3446	0.40	-0.0
4,015,814	+		Pf6N2E2_3446	0.40	+1.0
4,015,814	+		Pf6N2E2_3446	0.40	+1.0
4,015,814	+		Pf6N2E2_3446	0.40	-0.6
4,015,814	+		Pf6N2E2_3446	0.40	-0.2
4,015,814	+		Pf6N2E2_3446	0.40	+1.0
4,015,814	+		Pf6N2E2_3446	0.40	-1.0
4,015,814	+		Pf6N2E2_3446	0.40	-0.6
4,015,814	+		Pf6N2E2_3446	0.40	+1.0
4,015,814	+		Pf6N2E2_3446	0.40	+1.0
4,015,815	-		Pf6N2E2_3446	0.40	-0.0
4,015,815	-		Pf6N2E2_3446	0.40	+1.0
4,015,815	-		Pf6N2E2_3446	0.40	-0.0
4,015,815	-		Pf6N2E2_3446	0.40	+1.0
4,015,815	-		Pf6N2E2_3446	0.40	+1.0
4,015,815	-		Pf6N2E2_3446	0.40	+1.0
4,015,815	-		Pf6N2E2_3446	0.40	-0.8
4,015,815	-		Pf6N2E2_3446	0.40	+1.0
4,015,847	+		Pf6N2E2_3446	0.45	+1.0
4,015,889	+		Pf6N2E2_3446	0.52	+1.0
4,015,890	-		Pf6N2E2_3446	0.53	-0.0
4,015,929	-		Pf6N2E2_3446	0.59	-0.0
4,016,111	+				+1.0
4,016,111	+				-0.0
4,016,271	-				-0.0