Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3418

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,969,955	-		Pf6N2E2_3417	0.71	-0.5
3,969,993	+		Pf6N2E2_3417	0.72	-0.0
3,970,184	+		Pf6N2E2_3417	0.78	+1.0
3,970,185	-		Pf6N2E2_3417	0.78	+1.0
3,970,185	-		Pf6N2E2_3417	0.78	+1.0
3,970,185	-		Pf6N2E2_3417	0.78	+1.0
3,970,193	+		Pf6N2E2_3417	0.78	+1.0
3,970,245	-		Pf6N2E2_3417	0.80	-0.0
3,970,306	+		Pf6N2E2_3417	0.82	-0.0
3,970,306	+		Pf6N2E2_3417	0.82	+1.0
3,970,306	+		Pf6N2E2_3417	0.82	-0.6
3,970,306	+		Pf6N2E2_3417	0.82	-0.1
3,970,306	+		Pf6N2E2_3417	0.82	-0.4
3,970,307	-		Pf6N2E2_3417	0.82	-1.0
3,970,307	-		Pf6N2E2_3417	0.82	+1.0
3,970,383	+		Pf6N2E2_3417	0.84	-0.4
3,970,388	+		Pf6N2E2_3417	0.84	-0.8
3,970,389	-		Pf6N2E2_3417	0.84	+1.0
3,970,389	-		Pf6N2E2_3417	0.84	+1.0
3,970,389	-		Pf6N2E2_3417	0.84	-0.3
3,970,542	-		Pf6N2E2_3417	0.89	-0.0
3,970,671	+				+1.0
3,970,671	+				-0.0
3,970,671	+				-0.6
3,970,672	-				+0.0
3,970,672	-				-1.4
3,970,672	-				+1.0
3,970,672	-				-0.0
3,970,672	-				+0.4
3,970,755	+				-0.0
3,970,786	-				-0.2
3,970,786	-				-0.3
3,970,801	-				-1.4
3,970,867	-				-0.0
3,970,867	-				-1.4
3,970,876	-				-0.6
3,970,876	-				+1.0
3,970,878	+				+1.0
3,971,075	-				+1.0
3,971,228	-				-1.4
3,971,228	-				-1.0
3,971,318	-				+1.0
3,971,318	-				+1.0
3,971,318	-				+1.0
3,971,380	+		Pf6N2E2_3418	0.11	-0.8
3,971,380	+		Pf6N2E2_3418	0.11	-1.4
3,971,381	-		Pf6N2E2_3418	0.11	-0.0
3,971,437	+		Pf6N2E2_3418	0.12	+1.0
3,971,695	+		Pf6N2E2_3418	0.18	+1.0
3,971,695	+		Pf6N2E2_3418	0.18	+1.0
3,971,695	+		Pf6N2E2_3418	0.18	-0.0
3,971,696	-		Pf6N2E2_3418	0.18	-0.9
3,971,696	-		Pf6N2E2_3418	0.18	+1.0
3,971,696	-		Pf6N2E2_3418	0.18	-0.6
3,971,782	+		Pf6N2E2_3418	0.20	-0.0
3,971,782	+		Pf6N2E2_3418	0.20	-0.0
3,971,782	+		Pf6N2E2_3418	0.20	-0.0
3,971,782	+		Pf6N2E2_3418	0.20	-0.0
3,971,783	-		Pf6N2E2_3418	0.20	+1.0
3,971,783	-		Pf6N2E2_3418	0.20	-0.0
3,971,783	-		Pf6N2E2_3418	0.20	-0.0
3,971,783	-		Pf6N2E2_3418	0.20	+0.2
3,971,783	-		Pf6N2E2_3418	0.20	+1.0
3,971,897	-		Pf6N2E2_3418	0.22	-0.0
3,971,917	+		Pf6N2E2_3418	0.23	+1.0
3,971,918	-		Pf6N2E2_3418	0.23	-0.6
3,972,026	+		Pf6N2E2_3418	0.25	+1.0
3,972,027	-		Pf6N2E2_3418	0.25	-0.6
3,972,268	+		Pf6N2E2_3418	0.31	-0.3
3,972,268	+		Pf6N2E2_3418	0.31	-0.6
3,972,269	-		Pf6N2E2_3418	0.31	-0.0
3,972,269	-		Pf6N2E2_3418	0.31	+1.0
3,972,269	-		Pf6N2E2_3418	0.31	-1.4
3,972,269	-		Pf6N2E2_3418	0.31	-0.6
3,972,430	+		Pf6N2E2_3418	0.34	+1.0
3,972,430	+		Pf6N2E2_3418	0.34	+1.0
3,972,430	+		Pf6N2E2_3418	0.34	-0.6
3,972,431	-		Pf6N2E2_3418	0.34	+0.4
3,972,431	-		Pf6N2E2_3418	0.34	-0.0
3,972,431	-		Pf6N2E2_3418	0.34	-0.0
3,972,431	-		Pf6N2E2_3418	0.34	+1.0
3,972,477	-		Pf6N2E2_3418	0.35	+1.0
3,972,562	+		Pf6N2E2_3418	0.37	+0.4
3,972,562	+		Pf6N2E2_3418	0.37	-0.5
3,972,563	-		Pf6N2E2_3418	0.37	+1.0
3,972,620	-		Pf6N2E2_3418	0.38	-2.2
3,972,620	-		Pf6N2E2_3418	0.38	-0.5
3,972,752	-		Pf6N2E2_3418	0.41	-0.0
3,972,959	-		Pf6N2E2_3418	0.46	-0.6
3,972,959	-		Pf6N2E2_3418	0.46	-0.6
3,973,348	+		Pf6N2E2_3418	0.54	+1.0
3,973,348	+		Pf6N2E2_3418	0.54	+1.0
3,973,348	+		Pf6N2E2_3418	0.54	-0.5
3,973,348	+		Pf6N2E2_3418	0.54	+1.0
3,973,348	+		Pf6N2E2_3418	0.54	-0.6
3,973,348	+		Pf6N2E2_3418	0.54	-0.0
3,973,348	+		Pf6N2E2_3418	0.54	-1.2
3,973,349	-		Pf6N2E2_3418	0.54	-1.0
3,973,349	-		Pf6N2E2_3418	0.54	+1.0
3,973,349	-		Pf6N2E2_3418	0.54	-2.2
3,973,349	-		Pf6N2E2_3418	0.54	-0.0
3,973,349	-		Pf6N2E2_3418	0.54	-0.0
3,973,349	-		Pf6N2E2_3418	0.54	-0.0
3,973,349	-		Pf6N2E2_3418	0.54	+1.0
3,973,349	-		Pf6N2E2_3418	0.54	-0.4
3,973,349	-		Pf6N2E2_3418	0.54	-0.5
3,973,461	-		Pf6N2E2_3418	0.57	-0.0
3,973,832	+		Pf6N2E2_3418	0.65	-0.0
3,973,961	+		Pf6N2E2_3418	0.67	-0.6
3,974,005	-		Pf6N2E2_3418	0.68	-1.0
3,974,461	+		Pf6N2E2_3418	0.78	-0.2
3,974,644	+		Pf6N2E2_3418	0.82	+1.0
3,974,644	+		Pf6N2E2_3418	0.82	-1.0
3,974,645	-		Pf6N2E2_3418	0.82	+1.0
3,974,645	-		Pf6N2E2_3418	0.82	+1.0
3,974,727	-		Pf6N2E2_3418	0.84	-0.0
3,975,190	+				+1.0
3,975,190	+				+1.0
3,975,190	+				-0.0
3,975,191	-				+1.0
3,975,191	-				+1.0
3,975,478	+				+1.0
3,975,486	+				+1.0
3,975,486	+				+0.2
3,975,486	+				+1.0
3,975,486	+				-0.2
3,975,487	-				-0.0
3,975,487	-				-0.2
3,975,487	-				-3.0
3,975,487	-				+1.0
3,975,487	-				+1.0
3,975,640	+				-1.0
3,975,641	-				-1.8
3,975,641	-				+1.0
3,975,922	+		Pf6N2E2_3419	0.27	-0.7
3,975,940	+		Pf6N2E2_3419	0.28	+1.0
3,975,940	+		Pf6N2E2_3419	0.28	-0.6
3,975,940	+		Pf6N2E2_3419	0.28	-0.1
3,975,940	+		Pf6N2E2_3419	0.28	+0.6
3,976,010	+		Pf6N2E2_3419	0.32	+0.6
3,976,011	-		Pf6N2E2_3419	0.32	-0.4
3,976,150	+		Pf6N2E2_3419	0.41	-1.6
3,976,150	+		Pf6N2E2_3419	0.41	-1.2
3,976,297	+		Pf6N2E2_3419	0.50	+1.0
3,976,297	+		Pf6N2E2_3419	0.50	-0.2
3,976,297	+		Pf6N2E2_3419	0.50	-1.4
3,976,298	-		Pf6N2E2_3419	0.50	-0.0
3,976,298	-		Pf6N2E2_3419	0.50	-0.0
3,976,303	+		Pf6N2E2_3419	0.50	-1.4
3,976,303	+		Pf6N2E2_3419	0.50	-0.2
3,976,303	+		Pf6N2E2_3419	0.50	+1.0
3,976,303	+		Pf6N2E2_3419	0.50	-1.0
3,976,304	-		Pf6N2E2_3419	0.50	-0.6
3,976,304	-		Pf6N2E2_3419	0.50	-0.4
3,976,336	+		Pf6N2E2_3419	0.52	-0.5
3,976,336	+		Pf6N2E2_3419	0.52	+1.0
3,976,336	+		Pf6N2E2_3419	0.52	-0.0
3,976,337	-		Pf6N2E2_3419	0.52	-1.5
3,976,337	-		Pf6N2E2_3419	0.52	+1.0
3,976,337	-		Pf6N2E2_3419	0.52	-0.0
3,976,339	+		Pf6N2E2_3419	0.52	-0.4
3,976,339	+		Pf6N2E2_3419	0.52	-1.0
3,976,339	+		Pf6N2E2_3419	0.52	-0.0
3,976,340	-		Pf6N2E2_3419	0.52	+1.0
3,976,340	-		Pf6N2E2_3419	0.52	+1.0
3,976,340	-		Pf6N2E2_3419	0.52	-0.6