Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3343

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,870,300	-		Pf6N2E2_3342	0.89	-1.0
3,870,552	+				-0.0
3,870,552	+				-0.5
3,870,555	-				-0.4
3,870,605	+				-0.6
3,870,605	+				-0.6
3,870,605	+				-0.0
3,870,605	+				-0.8
3,870,605	+				-1.4
3,870,605	+				-0.6
3,870,605	+				-0.0
3,870,605	+				-0.7
3,870,605	+				-0.0
3,870,605	+				-0.2
3,870,605	+				-0.6
3,870,606	-				+1.0
3,870,606	-				-0.5
3,870,606	-				-0.0
3,870,606	-				+1.0
3,870,606	-				-0.1
3,870,606	-				-1.1
3,870,606	-				-1.6
3,870,606	-				-0.8
3,870,606	-				-0.6
3,870,606	-				-0.6
3,870,606	-				-0.0
3,870,606	-				-0.0
3,870,606	-				+1.0
3,870,607	+				-0.6
3,870,608	-				+1.0
3,870,612	+				-0.0
3,870,612	+				-0.6
3,870,612	+				+0.2
3,870,613	-				-0.6
3,870,613	-				+1.0
3,870,632	+				+1.0
3,870,633	-				-0.6
3,870,633	-				-0.0
3,870,637	+				-0.0
3,870,637	+				+0.7
3,870,690	+				-0.0
3,870,690	+				-1.0
3,870,690	+				-0.4
3,870,690	+				-0.0
3,870,690	+				-0.9
3,870,691	-				-0.0
3,870,691	-				+1.0
3,870,691	-				-0.6
3,870,691	-				-0.0
3,870,875	+				-0.8
3,870,991	-		Pf6N2E2_3343	0.18	-0.6
3,871,008	+		Pf6N2E2_3343	0.20	-0.9
3,871,009	-		Pf6N2E2_3343	0.20	-1.5
3,871,009	-		Pf6N2E2_3343	0.20	-0.6
3,871,250	+		Pf6N2E2_3343	0.49	-1.8
3,871,251	-		Pf6N2E2_3343	0.49	-1.2
3,871,421	+		Pf6N2E2_3343	0.69	-0.6
3,871,421	+		Pf6N2E2_3343	0.69	+1.0
3,871,464	-		Pf6N2E2_3343	0.74	+1.0
3,871,464	-		Pf6N2E2_3343	0.74	+1.0
3,871,778	+		Pf6N2E2_3344	0.19	-1.0
3,871,779	-		Pf6N2E2_3344	0.19	-0.0
3,871,843	+		Pf6N2E2_3344	0.30	+1.0
3,871,844	-		Pf6N2E2_3344	0.30	+1.0
3,871,844	-		Pf6N2E2_3344	0.30	-0.0
3,871,844	-		Pf6N2E2_3344	0.30	-0.6
3,871,907	+		Pf6N2E2_3344	0.42	+1.0
3,871,908	-		Pf6N2E2_3344	0.42	+1.0
3,871,908	-		Pf6N2E2_3344	0.42	-0.0
3,872,045	-		Pf6N2E2_3344	0.66	+0.1
3,872,126	+		Pf6N2E2_3344	0.81	-0.4
3,872,234	+				-0.0
3,872,235	-				-0.0
3,872,271	+				-0.7
3,872,272	-				-0.0
3,872,272	-				-0.0
3,872,465	+				+1.0
3,872,465	+				-0.0
3,872,465	+				-0.4
3,872,465	+				-0.6
3,872,466	-				+1.0
3,872,466	-				+1.0
3,872,466	-				-0.4