Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3295

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,800,423	+				+1.0
3,800,423	+				+1.0
3,800,424	-				+1.0
3,800,424	-				-0.0
3,800,424	-				-0.3
3,800,516	-		Pf6N2E2_3294	0.16	-0.0
3,800,561	+		Pf6N2E2_3294	0.20	-0.8
3,800,562	-		Pf6N2E2_3294	0.20	+1.0
3,800,565	+		Pf6N2E2_3294	0.21	+1.0
3,800,566	-		Pf6N2E2_3294	0.21	+1.0
3,800,566	-		Pf6N2E2_3294	0.21	+1.0
3,800,566	-		Pf6N2E2_3294	0.21	-1.0
3,800,566	-		Pf6N2E2_3294	0.21	+1.0
3,800,606	+		Pf6N2E2_3294	0.25	-0.0
3,800,606	+		Pf6N2E2_3294	0.25	-0.6
3,800,607	-		Pf6N2E2_3294	0.25	+1.0
3,800,607	-		Pf6N2E2_3294	0.25	+1.0
3,800,607	-		Pf6N2E2_3294	0.25	+1.0
3,800,607	-		Pf6N2E2_3294	0.25	-0.0
3,800,655	+		Pf6N2E2_3294	0.30	-1.9
3,800,655	+		Pf6N2E2_3294	0.30	-0.0
3,800,656	-		Pf6N2E2_3294	0.30	-2.4
3,800,656	-		Pf6N2E2_3294	0.30	-0.6
3,800,656	-		Pf6N2E2_3294	0.30	-0.6
3,800,771	+		Pf6N2E2_3294	0.42	-0.0
3,800,771	+		Pf6N2E2_3294	0.42	+1.0
3,800,772	-		Pf6N2E2_3294	0.42	-0.6
3,800,772	-		Pf6N2E2_3294	0.42	+1.0
3,800,772	-		Pf6N2E2_3294	0.42	-0.4
3,800,772	-		Pf6N2E2_3294	0.42	+1.0
3,800,856	-		Pf6N2E2_3294	0.51	-0.0
3,800,856	-		Pf6N2E2_3294	0.51	-0.6
3,800,858	+		Pf6N2E2_3294	0.51	-0.0
3,800,895	-		Pf6N2E2_3294	0.55	+1.0
3,800,909	+		Pf6N2E2_3294	0.56	+1.0
3,800,909	+		Pf6N2E2_3294	0.56	+1.0
3,800,963	+		Pf6N2E2_3294	0.62	+0.6
3,800,963	+		Pf6N2E2_3294	0.62	+1.0
3,800,963	+		Pf6N2E2_3294	0.62	-0.0
3,800,963	+		Pf6N2E2_3294	0.62	+1.0
3,800,963	+		Pf6N2E2_3294	0.62	-2.0
3,800,964	-		Pf6N2E2_3294	0.62	+1.0
3,801,086	+		Pf6N2E2_3294	0.75	+0.0
3,801,086	+		Pf6N2E2_3294	0.75	+1.0
3,801,087	-		Pf6N2E2_3294	0.75	-0.6
3,801,087	-		Pf6N2E2_3294	0.75	+1.0
3,801,087	-		Pf6N2E2_3294	0.75	+1.0
3,801,087	-		Pf6N2E2_3294	0.75	-0.0
3,801,143	+		Pf6N2E2_3294	0.81	-1.0
3,801,156	+		Pf6N2E2_3294	0.82	+1.0
3,801,156	+		Pf6N2E2_3294	0.82	-0.0
3,801,165	+		Pf6N2E2_3294	0.83	+1.0
3,801,165	+		Pf6N2E2_3294	0.83	+1.0
3,801,165	+		Pf6N2E2_3294	0.83	+1.0
3,801,291	-				+1.0
3,801,291	-				+1.0
3,801,327	+				-0.0
3,801,327	+				-0.6
3,801,327	+				+0.2
3,801,327	+				-0.0
3,801,327	+				-0.0
3,801,327	+				+1.0
3,801,327	+				+1.0
3,801,327	+				-0.0
3,801,327	+				-0.0
3,801,327	+				+1.0
3,801,327	+				-1.0
3,801,327	+				-0.6
3,801,327	+				+1.0
3,801,328	-				+1.0
3,801,328	-				-1.4
3,801,328	-				+1.0
3,801,328	-				+1.0
3,801,328	-				-1.0
3,801,328	-				-0.0
3,801,328	-				+1.0
3,801,328	-				-0.4
3,801,328	-				+0.6
3,801,329	+				-0.0
3,801,329	+				-0.8
3,801,329	+				-0.7
3,801,329	+				-0.0
3,801,329	+				-0.6
3,801,330	-				+1.0
3,801,330	-				-0.6
3,801,330	-				+1.0
3,801,353	+				-0.0
3,801,353	+				+0.1
3,801,353	+				-0.6
3,801,540	+		Pf6N2E2_3295	0.13	-0.0
3,801,540	+		Pf6N2E2_3295	0.13	+1.0
3,801,541	-		Pf6N2E2_3295	0.14	+1.0
3,801,541	-		Pf6N2E2_3295	0.14	-0.0
3,801,570	+		Pf6N2E2_3295	0.17	-0.0
3,801,570	+		Pf6N2E2_3295	0.17	-1.0
3,801,571	-		Pf6N2E2_3295	0.17	+1.0
3,801,571	-		Pf6N2E2_3295	0.17	-0.6
3,801,655	+		Pf6N2E2_3295	0.26	+1.0
3,801,656	-		Pf6N2E2_3295	0.26	-0.9
3,801,682	+		Pf6N2E2_3295	0.29	+1.0
3,801,762	+		Pf6N2E2_3295	0.37	+1.0
3,801,762	+		Pf6N2E2_3295	0.37	+1.0
3,801,762	+		Pf6N2E2_3295	0.37	-1.0
3,801,762	+		Pf6N2E2_3295	0.37	-0.8
3,801,762	+		Pf6N2E2_3295	0.37	-0.9
3,801,763	-		Pf6N2E2_3295	0.37	-0.3
3,801,808	-		Pf6N2E2_3295	0.42	+1.0
3,801,904	-		Pf6N2E2_3295	0.52	-0.0
3,801,904	-		Pf6N2E2_3295	0.52	-0.7
3,801,904	-		Pf6N2E2_3295	0.52	-1.6
3,801,904	-		Pf6N2E2_3295	0.52	-1.0
3,801,904	-		Pf6N2E2_3295	0.52	-1.6
3,801,936	+		Pf6N2E2_3295	0.56	-0.0
3,801,936	+		Pf6N2E2_3295	0.56	-0.0
3,801,936	+		Pf6N2E2_3295	0.56	-1.0
3,801,936	+		Pf6N2E2_3295	0.56	-0.0
3,801,936	+		Pf6N2E2_3295	0.56	-0.0
3,801,936	+		Pf6N2E2_3295	0.56	-0.3
3,801,936	+		Pf6N2E2_3295	0.56	-0.6
3,801,937	-		Pf6N2E2_3295	0.56	-0.0
3,801,993	+		Pf6N2E2_3295	0.62	-0.6
3,801,993	+		Pf6N2E2_3295	0.62	-1.4
3,801,993	+		Pf6N2E2_3295	0.62	-1.0
3,801,994	-		Pf6N2E2_3295	0.62	+1.0
3,802,056	+		Pf6N2E2_3295	0.68	-1.4
3,802,056	+		Pf6N2E2_3295	0.68	-0.0
3,802,056	+		Pf6N2E2_3295	0.68	+1.6
3,802,056	+		Pf6N2E2_3295	0.68	-0.6
3,802,056	+		Pf6N2E2_3295	0.68	-1.0
3,802,056	+		Pf6N2E2_3295	0.68	+1.0
3,802,056	+		Pf6N2E2_3295	0.68	-0.6
3,802,056	+		Pf6N2E2_3295	0.68	-0.0
3,802,056	+		Pf6N2E2_3295	0.68	+1.0
3,802,056	+		Pf6N2E2_3295	0.68	-0.4
3,802,056	+		Pf6N2E2_3295	0.68	+1.0
3,802,056	+		Pf6N2E2_3295	0.68	-0.0
3,802,056	+		Pf6N2E2_3295	0.68	-0.3
3,802,056	+		Pf6N2E2_3295	0.68	-0.0
3,802,057	-		Pf6N2E2_3295	0.68	+1.0
3,802,057	-		Pf6N2E2_3295	0.68	-0.5
3,802,057	-		Pf6N2E2_3295	0.68	-0.0
3,802,057	-		Pf6N2E2_3295	0.68	-0.0
3,802,057	-		Pf6N2E2_3295	0.68	+1.0
3,802,057	-		Pf6N2E2_3295	0.68	-3.0
3,802,057	-		Pf6N2E2_3295	0.68	+0.2
3,802,057	-		Pf6N2E2_3295	0.68	+1.0
3,802,057	-		Pf6N2E2_3295	0.68	-0.0
3,802,140	+		Pf6N2E2_3295	0.77	-0.5
3,802,141	-		Pf6N2E2_3295	0.77	+1.0
3,802,141	-		Pf6N2E2_3295	0.77	-0.6
3,802,269	+				-0.0
3,802,269	+				+1.0
3,802,270	-				+1.0
3,802,270	-				-0.6
3,802,270	-				+1.0
3,802,382	-				-0.6
3,802,396	-				-0.0
3,802,454	+				-0.6
3,802,454	+				-0.6
3,802,547	+				+1.0
3,802,547	+				-1.0
3,802,547	+				+1.0
3,802,547	+				+1.0
3,802,548	-				+1.0
3,802,548	-				-1.2
3,802,548	-				+1.0
3,802,548	-				+1.0
3,802,556	+				+1.0
3,802,557	-				+1.0
3,802,645	+				-0.3
3,802,646	-				-1.0
3,802,646	-				+1.0
3,802,648	+				-0.9
3,802,649	-				-0.6
3,802,649	-				-0.8
3,802,649	-				-0.6
3,802,649	-				-1.4
3,802,792	+		Pf6N2E2_3296	0.16	-0.5
3,803,059	+		Pf6N2E2_3296	0.33	-0.0
3,803,060	-		Pf6N2E2_3296	0.33	-0.0
3,803,068	+		Pf6N2E2_3296	0.33	+1.0
3,803,069	-		Pf6N2E2_3296	0.33	+1.0
3,803,069	-		Pf6N2E2_3296	0.33	+1.0
3,803,134	+		Pf6N2E2_3296	0.38	+1.0
3,803,135	-		Pf6N2E2_3296	0.38	-2.9
3,803,135	-		Pf6N2E2_3296	0.38	+1.0
3,803,135	-		Pf6N2E2_3296	0.38	+1.0
3,803,135	-		Pf6N2E2_3296	0.38	-0.0
3,803,135	-		Pf6N2E2_3296	0.38	-0.5