Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2527

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,983,114	+				-0.2
2,983,114	+				+0.5
2,983,115	-				-1.1
2,983,115	-				-0.4
2,983,682	+		Pf6N2E2_2526	0.83	+1.0
2,983,682	+		Pf6N2E2_2526	0.83	+1.0
2,983,682	+		Pf6N2E2_2526	0.83	+1.0
2,983,682	+		Pf6N2E2_2526	0.83	-1.0
2,983,682	+		Pf6N2E2_2526	0.83	-0.2
2,983,682	+		Pf6N2E2_2526	0.83	+1.8
2,983,683	-		Pf6N2E2_2526	0.84	+0.1
2,983,683	-		Pf6N2E2_2526	0.84	+0.0
2,983,688	+		Pf6N2E2_2526	0.84	+1.0
2,983,689	-		Pf6N2E2_2526	0.85	-0.3
2,983,942	+				-0.4
2,983,942	+				-1.0
2,983,942	+				+1.0
2,983,959	+				+1.0
2,983,959	+				-0.5
2,983,960	-				+1.0
2,984,057	-		Pf6N2E2_2527	0.13	-0.8
2,984,119	+		Pf6N2E2_2527	0.21	-1.6
2,984,119	+		Pf6N2E2_2527	0.21	-1.1
2,984,197	+		Pf6N2E2_2527	0.32	-1.9
2,984,197	+		Pf6N2E2_2527	0.32	-1.8
2,984,198	-		Pf6N2E2_2527	0.32	-2.4
2,984,198	-		Pf6N2E2_2527	0.32	-1.7
2,984,280	+		Pf6N2E2_2527	0.43	-1.5
2,984,355	+		Pf6N2E2_2527	0.53	-1.8
2,984,444	-		Pf6N2E2_2527	0.65	-2.5
2,984,455	+		Pf6N2E2_2527	0.67	-1.4
2,984,644	+				-0.1
2,984,727	+				+0.0
2,984,727	+				+0.0
2,984,728	-				-0.7
2,984,794	+				+0.0
2,984,795	-				+1.0
2,984,836	+				+0.0
2,984,902	+				-0.9
2,984,903	-				-1.8
2,984,903	-				-2.1
2,984,924	+				-1.0
2,984,924	+				+1.0
2,984,925	-				-2.0
2,984,925	-				+1.0
2,984,925	-				+0.0
2,984,925	-				+1.0
2,984,925	-				+0.1
2,984,985	+				+1.0
2,984,985	+				+1.0
2,984,986	-				+0.0
2,985,033	+				+1.0
2,985,033	+				-0.3
2,985,033	+				-1.0
2,985,034	-				+1.0
2,985,034	-				-0.9
2,985,034	-				-0.6
2,985,034	-				+1.0
2,985,034	-				-0.5
2,985,034	-				+1.0
2,985,034	-				-0.7
2,985,054	-				+1.0
2,985,274	-		Pf6N2E2_2528	0.24	+0.0
2,985,336	+		Pf6N2E2_2528	0.30	+1.0
2,985,336	+		Pf6N2E2_2528	0.30	+0.0
2,985,336	+		Pf6N2E2_2528	0.30	-0.7
2,985,336	+		Pf6N2E2_2528	0.30	+1.0
2,985,336	+		Pf6N2E2_2528	0.30	+1.0
2,985,336	+		Pf6N2E2_2528	0.30	+1.0
2,985,336	+		Pf6N2E2_2528	0.30	-0.4
2,985,337	-		Pf6N2E2_2528	0.31	-0.6
2,985,337	-		Pf6N2E2_2528	0.31	-0.8
2,985,337	-		Pf6N2E2_2528	0.31	-1.4
2,985,337	-		Pf6N2E2_2528	0.31	-1.7
2,985,337	-		Pf6N2E2_2528	0.31	-0.2
2,985,337	-		Pf6N2E2_2528	0.31	+0.0
2,985,337	-		Pf6N2E2_2528	0.31	+0.0
2,985,337	-		Pf6N2E2_2528	0.31	+1.0
2,985,337	-		Pf6N2E2_2528	0.31	+1.0
2,985,339	-		Pf6N2E2_2528	0.31	-0.7