Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2115

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,511,387	-				+0.9
2,511,387	-				+0.9
2,511,702	+		Pf6N2E2_2114	0.44	+0.9
2,511,947	-		Pf6N2E2_2114	0.78	-0.7
2,511,947	-		Pf6N2E2_2114	0.78	+1.4
2,512,138	-				-1.7
2,512,183	-				+0.9
2,512,265	-				+0.9
2,512,554	+		Pf6N2E2_2115	0.14	-0.5
2,512,555	-		Pf6N2E2_2115	0.14	-0.1
2,512,555	-		Pf6N2E2_2115	0.14	-0.1
2,512,633	+		Pf6N2E2_2115	0.20	-0.1
2,512,633	+		Pf6N2E2_2115	0.20	-0.1
2,512,633	+		Pf6N2E2_2115	0.20	+0.9
2,512,633	+		Pf6N2E2_2115	0.20	+0.9
2,512,633	+		Pf6N2E2_2115	0.20	+0.9
2,512,634	-		Pf6N2E2_2115	0.20	-1.4
2,512,660	-		Pf6N2E2_2115	0.22	-0.1
2,512,712	+		Pf6N2E2_2115	0.25	-0.1
2,512,791	+		Pf6N2E2_2115	0.31	-0.1
2,512,792	-		Pf6N2E2_2115	0.31	+0.9
2,512,792	-		Pf6N2E2_2115	0.31	-0.9
2,512,792	-		Pf6N2E2_2115	0.31	+0.9
2,512,792	-		Pf6N2E2_2115	0.31	-0.1
2,512,792	-		Pf6N2E2_2115	0.31	-0.1
2,512,848	+		Pf6N2E2_2115	0.35	+0.9
2,512,848	+		Pf6N2E2_2115	0.35	+0.9
2,512,848	+		Pf6N2E2_2115	0.35	+0.9
2,512,849	-		Pf6N2E2_2115	0.35	-0.9
2,512,849	-		Pf6N2E2_2115	0.35	-0.1
2,512,849	-		Pf6N2E2_2115	0.35	-0.1
2,512,849	-		Pf6N2E2_2115	0.35	+0.9
2,512,852	-		Pf6N2E2_2115	0.35	+0.9
2,512,852	-		Pf6N2E2_2115	0.35	-0.1
2,512,852	-		Pf6N2E2_2115	0.35	-0.7
2,512,852	-		Pf6N2E2_2115	0.35	-0.7
2,512,852	-		Pf6N2E2_2115	0.35	+0.9
2,512,852	-		Pf6N2E2_2115	0.35	-0.1
2,513,001	+		Pf6N2E2_2115	0.45	+0.9
2,513,002	-		Pf6N2E2_2115	0.45	-1.0
2,513,002	-		Pf6N2E2_2115	0.45	+0.6
2,513,002	-		Pf6N2E2_2115	0.45	-5.0
2,513,220	+		Pf6N2E2_2115	0.60	-0.1
2,513,220	+		Pf6N2E2_2115	0.60	-0.4
2,513,221	-		Pf6N2E2_2115	0.61	-0.1
2,513,221	-		Pf6N2E2_2115	0.61	-1.5
2,513,221	-		Pf6N2E2_2115	0.61	+0.9
2,513,245	-		Pf6N2E2_2115	0.62	-1.7
2,513,355	+		Pf6N2E2_2115	0.70	+0.9
2,513,355	+		Pf6N2E2_2115	0.70	+0.9
2,513,355	+		Pf6N2E2_2115	0.70	-1.4
2,513,355	+		Pf6N2E2_2115	0.70	+0.9
2,513,355	+		Pf6N2E2_2115	0.70	-1.1
2,513,356	-		Pf6N2E2_2115	0.70	+0.9
2,513,356	-		Pf6N2E2_2115	0.70	-0.8
2,513,356	-		Pf6N2E2_2115	0.70	-0.7
2,513,356	-		Pf6N2E2_2115	0.70	-0.1
2,513,356	-		Pf6N2E2_2115	0.70	+0.9
2,513,356	-		Pf6N2E2_2115	0.70	+0.9
2,513,356	-		Pf6N2E2_2115	0.70	+0.7
2,513,673	+				-1.4
2,513,673	+				+0.9
2,513,674	-				-0.2
2,513,674	-				+0.9
2,513,729	+				+0.9
2,513,730	-				+0.9
2,513,931	+				-0.4
2,514,052	+		Pf6N2E2_2116	0.18	+0.9
2,514,053	-		Pf6N2E2_2116	0.18	-0.7
2,514,069	+		Pf6N2E2_2116	0.19	-0.6
2,514,070	-		Pf6N2E2_2116	0.19	+0.9
2,514,263	-		Pf6N2E2_2116	0.34	-1.7
2,514,271	+		Pf6N2E2_2116	0.34	+0.9
2,514,271	+		Pf6N2E2_2116	0.34	-1.7
2,514,578	+		Pf6N2E2_2116	0.57	+0.9
2,514,578	+		Pf6N2E2_2116	0.57	-0.1
2,514,579	-		Pf6N2E2_2116	0.57	-0.1
2,514,587	-		Pf6N2E2_2116	0.58	-0.8