Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2005

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
2,378,129	-		Pf6N2E2_2004	0.22	+0.9
2,378,207	+		Pf6N2E2_2004	0.29	-0.7
2,378,207	+		Pf6N2E2_2004	0.29	-0.3
2,378,340	-		Pf6N2E2_2004	0.41	-0.8
2,378,340	-		Pf6N2E2_2004	0.41	-1.1
2,378,342	+		Pf6N2E2_2004	0.41	-0.1
2,378,364	+		Pf6N2E2_2004	0.43	+0.9
2,378,413	+		Pf6N2E2_2004	0.47	-0.1
2,378,466	-		Pf6N2E2_2004	0.52	-0.1
2,378,466	-		Pf6N2E2_2004	0.52	+0.9
2,378,524	-		Pf6N2E2_2004	0.57	+2.5
2,378,625	-		Pf6N2E2_2004	0.66	+0.9
2,378,811	-		Pf6N2E2_2004	0.82	-0.1
2,378,811	-		Pf6N2E2_2004	0.82	+0.9
2,378,811	-		Pf6N2E2_2004	0.82	-0.1
2,378,811	-		Pf6N2E2_2004	0.82	+0.9
2,378,811	-		Pf6N2E2_2004	0.82	-1.4
2,378,812	+		Pf6N2E2_2004	0.82	+0.9
2,378,813	-		Pf6N2E2_2004	0.82	+0.9
2,378,813	-		Pf6N2E2_2004	0.82	+0.9
2,378,813	-		Pf6N2E2_2004	0.82	-0.1
2,378,864	+		Pf6N2E2_2004	0.87	-0.0
2,378,864	+		Pf6N2E2_2004	0.87	+0.9
2,378,864	+		Pf6N2E2_2004	0.87	+0.9
2,378,865	-		Pf6N2E2_2004	0.87	+0.9
2,378,876	-		Pf6N2E2_2004	0.88	+0.9
2,379,015	+				-0.1
2,379,017	+				-0.1
2,379,017	+				+0.9
2,379,188	+				-0.4
2,379,188	+				-0.1
2,379,238	+				+0.9
2,379,300	+		Pf6N2E2_2005	0.10	-0.7
2,379,370	+		Pf6N2E2_2005	0.13	+0.9
2,379,370	+		Pf6N2E2_2005	0.13	+0.9
2,379,370	+		Pf6N2E2_2005	0.13	-1.6
2,379,371	-		Pf6N2E2_2005	0.13	+0.5
2,379,371	-		Pf6N2E2_2005	0.13	-0.1
2,379,371	-		Pf6N2E2_2005	0.13	+0.9
2,379,392	+		Pf6N2E2_2005	0.13	+0.9
2,379,392	+		Pf6N2E2_2005	0.13	+1.3
2,379,392	+		Pf6N2E2_2005	0.13	+0.9
2,379,393	-		Pf6N2E2_2005	0.13	-0.1
2,379,393	-		Pf6N2E2_2005	0.13	+0.9
2,379,393	-		Pf6N2E2_2005	0.13	-1.3
2,379,393	-		Pf6N2E2_2005	0.13	+0.9
2,379,393	-		Pf6N2E2_2005	0.13	-1.1
2,379,396	+		Pf6N2E2_2005	0.14	+0.9
2,379,396	+		Pf6N2E2_2005	0.14	+0.3
2,379,396	+		Pf6N2E2_2005	0.14	+0.9
2,379,450	+		Pf6N2E2_2005	0.15	+0.9
2,379,456	+		Pf6N2E2_2005	0.16	-0.1
2,379,466	+		Pf6N2E2_2005	0.16	-1.1
2,379,466	+		Pf6N2E2_2005	0.16	+0.9
2,379,466	+		Pf6N2E2_2005	0.16	+0.9
2,379,466	+		Pf6N2E2_2005	0.16	-1.3
2,379,466	+		Pf6N2E2_2005	0.16	+0.9
2,379,467	-		Pf6N2E2_2005	0.16	+0.9
2,379,467	-		Pf6N2E2_2005	0.16	+0.9
2,379,467	-		Pf6N2E2_2005	0.16	+0.9
2,379,470	+		Pf6N2E2_2005	0.16	+0.9
2,379,470	+		Pf6N2E2_2005	0.16	+0.9
2,379,470	+		Pf6N2E2_2005	0.16	+0.9
2,379,470	+		Pf6N2E2_2005	0.16	-0.1
2,379,470	+		Pf6N2E2_2005	0.16	+0.9
2,379,471	-		Pf6N2E2_2005	0.16	-1.1
2,379,471	-		Pf6N2E2_2005	0.16	+0.9
2,379,471	-		Pf6N2E2_2005	0.16	+0.9
2,379,471	-		Pf6N2E2_2005	0.16	+0.9
2,379,471	-		Pf6N2E2_2005	0.16	+0.9
2,379,473	+		Pf6N2E2_2005	0.16	+0.9
2,379,473	+		Pf6N2E2_2005	0.16	+0.9
2,379,473	+		Pf6N2E2_2005	0.16	+0.9
2,379,493	-		Pf6N2E2_2005	0.17	-0.1
2,379,589	+		Pf6N2E2_2005	0.20	-0.1
2,379,589	+		Pf6N2E2_2005	0.20	+0.9
2,379,975	+		Pf6N2E2_2005	0.32	-0.1
2,380,004	-		Pf6N2E2_2005	0.33	-1.4
2,380,004	-		Pf6N2E2_2005	0.33	-0.3
2,380,045	-		Pf6N2E2_2005	0.35	-1.1
2,380,045	-		Pf6N2E2_2005	0.35	-0.1
2,380,045	-		Pf6N2E2_2005	0.35	+0.9
2,380,045	-		Pf6N2E2_2005	0.35	-0.8
2,380,045	-		Pf6N2E2_2005	0.35	+0.9
2,380,100	+		Pf6N2E2_2005	0.37	+0.9
2,380,157	-		Pf6N2E2_2005	0.38	+0.9
2,380,181	+		Pf6N2E2_2005	0.39	-0.1
2,380,182	-		Pf6N2E2_2005	0.39	+0.9
2,380,182	-		Pf6N2E2_2005	0.39	-0.8
2,380,185	-		Pf6N2E2_2005	0.39	-3.0
2,380,227	-		Pf6N2E2_2005	0.41	+0.9
2,380,227	-		Pf6N2E2_2005	0.41	+0.9
2,380,255	+		Pf6N2E2_2005	0.42	-0.7
2,380,255	+		Pf6N2E2_2005	0.42	-0.7
2,380,256	-		Pf6N2E2_2005	0.42	-0.1
2,380,256	-		Pf6N2E2_2005	0.42	+0.9
2,380,256	-		Pf6N2E2_2005	0.42	+0.9
2,380,288	-		Pf6N2E2_2005	0.43	+1.1
2,380,288	-		Pf6N2E2_2005	0.43	-0.5
2,380,290	-		Pf6N2E2_2005	0.43	-0.1
2,380,290	-		Pf6N2E2_2005	0.43	-1.0
2,380,380	-		Pf6N2E2_2005	0.46	-0.1
2,380,380	-		Pf6N2E2_2005	0.46	+0.9
2,380,380	-		Pf6N2E2_2005	0.46	+0.9
2,380,463	+		Pf6N2E2_2005	0.48	+0.9
2,380,464	-		Pf6N2E2_2005	0.48	-0.7
2,380,464	-		Pf6N2E2_2005	0.48	-0.1
2,380,464	-		Pf6N2E2_2005	0.48	+0.9
2,380,464	-		Pf6N2E2_2005	0.48	+0.5
2,380,464	-		Pf6N2E2_2005	0.48	-0.7
2,380,464	-		Pf6N2E2_2005	0.48	+0.9
2,380,464	-		Pf6N2E2_2005	0.48	-0.7
2,380,467	+		Pf6N2E2_2005	0.48	+0.9
2,380,468	-		Pf6N2E2_2005	0.49	-2.3
2,380,468	-		Pf6N2E2_2005	0.49	-1.3
2,380,492	-		Pf6N2E2_2005	0.49	-0.1
2,380,519	-		Pf6N2E2_2005	0.50	-2.3
2,380,519	-		Pf6N2E2_2005	0.50	-0.1
2,380,521	-		Pf6N2E2_2005	0.50	-0.3
2,380,521	-		Pf6N2E2_2005	0.50	+0.9
2,380,521	-		Pf6N2E2_2005	0.50	+0.9
2,380,569	+		Pf6N2E2_2005	0.52	+0.9
2,380,569	+		Pf6N2E2_2005	0.52	-0.7
2,380,571	+		Pf6N2E2_2005	0.52	+0.9
2,380,633	-		Pf6N2E2_2005	0.54	+0.9
2,380,633	-		Pf6N2E2_2005	0.54	-0.1
2,380,633	-		Pf6N2E2_2005	0.54	+0.9
2,380,633	-		Pf6N2E2_2005	0.54	-0.7
2,380,633	-		Pf6N2E2_2005	0.54	+0.9
2,380,633	-		Pf6N2E2_2005	0.54	+0.9
2,380,716	-		Pf6N2E2_2005	0.57	-0.2
2,380,716	-		Pf6N2E2_2005	0.57	-0.7
2,380,834	-		Pf6N2E2_2005	0.60	+0.9
2,380,834	-		Pf6N2E2_2005	0.60	-1.1
2,380,861	-		Pf6N2E2_2005	0.61	+0.9
2,380,861	-		Pf6N2E2_2005	0.61	+0.9
2,380,861	-		Pf6N2E2_2005	0.61	+0.9
2,380,863	-		Pf6N2E2_2005	0.61	-1.1
2,380,863	-		Pf6N2E2_2005	0.61	-0.1
2,380,863	-		Pf6N2E2_2005	0.61	-1.7
2,380,975	-		Pf6N2E2_2005	0.65	-0.7
2,380,975	-		Pf6N2E2_2005	0.65	-1.4
2,380,983	+		Pf6N2E2_2005	0.65	+0.9
2,380,984	-		Pf6N2E2_2005	0.65	-0.7
2,380,984	-		Pf6N2E2_2005	0.65	+0.9
2,380,984	-		Pf6N2E2_2005	0.65	-1.7
2,380,984	-		Pf6N2E2_2005	0.65	+0.9
2,381,152	-		Pf6N2E2_2005	0.71	-0.1
2,381,176	-		Pf6N2E2_2005	0.72	+0.9
2,381,203	-		Pf6N2E2_2005	0.72	-0.1
2,381,203	-		Pf6N2E2_2005	0.72	-0.1
2,381,203	-		Pf6N2E2_2005	0.72	+0.9
2,381,254	-		Pf6N2E2_2005	0.74	-0.4
2,381,317	-		Pf6N2E2_2005	0.76	+0.9
2,381,317	-		Pf6N2E2_2005	0.76	+0.3
2,381,317	-		Pf6N2E2_2005	0.76	-0.1
2,381,317	-		Pf6N2E2_2005	0.76	-0.1
2,381,317	-		Pf6N2E2_2005	0.76	-0.1
2,381,317	-		Pf6N2E2_2005	0.76	+0.9
2,381,319	-		Pf6N2E2_2005	0.76	+0.9
2,381,319	-		Pf6N2E2_2005	0.76	+0.3
2,381,319	-		Pf6N2E2_2005	0.76	+0.9
2,381,319	-		Pf6N2E2_2005	0.76	-0.6
2,381,326	-		Pf6N2E2_2005	0.76	+0.9
2,381,326	-		Pf6N2E2_2005	0.76	+0.9
2,381,492	+		Pf6N2E2_2005	0.82	+0.1
2,381,493	-		Pf6N2E2_2005	0.82	-0.7
2,381,493	-		Pf6N2E2_2005	0.82	+0.9
2,381,493	-		Pf6N2E2_2005	0.82	+0.9
2,381,496	+		Pf6N2E2_2005	0.82	-0.1
2,381,497	-		Pf6N2E2_2005	0.82	+0.5
2,381,497	-		Pf6N2E2_2005	0.82	-0.3
2,381,506	+		Pf6N2E2_2005	0.82	+0.9
2,381,511	-		Pf6N2E2_2005	0.83	+0.9
2,381,511	-		Pf6N2E2_2005	0.83	-0.1
2,381,511	-		Pf6N2E2_2005	0.83	+0.9
2,381,511	-		Pf6N2E2_2005	0.83	-0.7
2,381,547	+		Pf6N2E2_2005	0.84	+0.9
2,381,549	+		Pf6N2E2_2005	0.84	-0.7
2,381,549	+		Pf6N2E2_2005	0.84	-1.5
2,381,594	+		Pf6N2E2_2005	0.85	+0.9
2,381,595	-		Pf6N2E2_2005	0.85	-0.1
2,381,595	-		Pf6N2E2_2005	0.85	-0.7
2,381,595	-		Pf6N2E2_2005	0.85	-0.1
2,381,595	-		Pf6N2E2_2005	0.85	-0.4
2,381,595	-		Pf6N2E2_2005	0.85	-0.1
2,381,595	-		Pf6N2E2_2005	0.85	+0.9
2,381,595	-		Pf6N2E2_2005	0.85	+0.9
2,381,595	-		Pf6N2E2_2005	0.85	+0.9
2,381,595	-		Pf6N2E2_2005	0.85	-0.5
2,381,595	-		Pf6N2E2_2005	0.85	+0.9
2,381,595	-		Pf6N2E2_2005	0.85	+0.9
2,381,595	-		Pf6N2E2_2005	0.85	+0.9
2,381,598	+		Pf6N2E2_2005	0.85	-1.0
2,381,598	+		Pf6N2E2_2005	0.85	+0.9
2,381,598	+		Pf6N2E2_2005	0.85	+0.9
2,381,599	-		Pf6N2E2_2005	0.85	+1.5
2,381,599	-		Pf6N2E2_2005	0.85	+0.9
2,381,599	-		Pf6N2E2_2005	0.85	+0.1
2,381,599	-		Pf6N2E2_2005	0.85	-0.1
2,381,600	+		Pf6N2E2_2005	0.85	+0.9
2,381,625	+		Pf6N2E2_2005	0.86	+0.9
2,381,626	-		Pf6N2E2_2005	0.86	-0.1
2,381,626	-		Pf6N2E2_2005	0.86	-0.7
2,381,639	+		Pf6N2E2_2005	0.87	+0.9
2,381,640	-		Pf6N2E2_2005	0.87	-0.1
2,381,661	+		Pf6N2E2_2005	0.87	-1.1
2,381,661	+		Pf6N2E2_2005	0.87	+0.9
2,381,661	+		Pf6N2E2_2005	0.87	+0.9
2,381,661	+		Pf6N2E2_2005	0.87	+0.9
2,381,662	-		Pf6N2E2_2005	0.87	+0.9
2,381,662	-		Pf6N2E2_2005	0.87	+0.9
2,381,662	-		Pf6N2E2_2005	0.87	+0.9
2,381,670	+		Pf6N2E2_2005	0.88	-1.4
2,381,670	+		Pf6N2E2_2005	0.88	-1.4
2,381,670	+		Pf6N2E2_2005	0.88	+0.9
2,381,670	+		Pf6N2E2_2005	0.88	+0.9
2,381,671	-		Pf6N2E2_2005	0.88	+0.9
2,381,671	-		Pf6N2E2_2005	0.88	-0.1
2,381,671	-		Pf6N2E2_2005	0.88	-0.7
2,381,671	-		Pf6N2E2_2005	0.88	+0.7
2,381,671	-		Pf6N2E2_2005	0.88	-0.9
2,381,671	-		Pf6N2E2_2005	0.88	-0.6
2,381,671	-		Pf6N2E2_2005	0.88	-0.8
2,381,671	-		Pf6N2E2_2005	0.88	-1.0
2,381,671	-		Pf6N2E2_2005	0.88	-0.1
2,381,737	+		Pf6N2E2_2005	0.90	-0.7
2,381,738	-		Pf6N2E2_2005	0.90	+0.9
2,381,771	+				+0.9
2,381,823	-				+0.9
2,381,865	-				+1.1
2,381,865	-				+0.9
2,381,865	-				-0.7
2,381,865	-				+0.9
2,381,888	-				+0.5
2,381,913	-				-0.1
2,381,913	-				-0.1
2,381,913	-				-0.1
2,381,913	-				-0.1
2,381,948	-				+0.9
2,381,979	+				+0.9
2,381,979	+				+0.9
2,381,979	+				+0.9
2,381,979	+				+0.9
2,381,980	-				-0.2
2,381,980	-				+0.1
2,381,980	-				+0.9
2,381,980	-				+0.9
2,381,981	+				-1.4
2,381,982	-				+0.9
2,381,988	+				+0.9
2,381,988	+				-0.1
2,381,988	+				+0.9
2,381,988	+				+0.9
2,381,988	+				-0.1
2,381,988	+				+0.2
2,381,989	-				-0.1
2,381,989	-				+0.9
2,381,989	-				-0.5
2,381,989	-				+0.9
2,381,989	-				-0.7
2,381,989	-				-1.4
2,382,050	+				+0.9
2,382,051	-				-0.5
2,382,051	-				-0.7
2,382,051	-				-0.9
2,382,054	-				-0.7
2,382,054	-				+0.4
2,382,054	-				-0.1
2,382,054	-				+0.9
2,382,095	-				+0.9
2,382,160	-				+2.5
2,382,224	-				-0.1
2,382,371	-				+0.9
2,382,538	+				+0.9
2,382,539	-				-0.6
2,382,650	-		Pf6N2E2_2006	0.11	-0.7
2,382,650	-		Pf6N2E2_2006	0.11	+0.9
2,382,650	-		Pf6N2E2_2006	0.11	-0.1
2,382,650	-		Pf6N2E2_2006	0.11	+0.9
2,382,773	+		Pf6N2E2_2006	0.13	-0.7
2,382,774	-		Pf6N2E2_2006	0.13	+0.9
2,382,774	-		Pf6N2E2_2006	0.13	-0.1
2,382,774	-		Pf6N2E2_2006	0.13	+0.9
2,382,774	-		Pf6N2E2_2006	0.13	-0.3
2,382,981	+		Pf6N2E2_2006	0.17	+0.9
2,383,021	-		Pf6N2E2_2006	0.18	-0.8