Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1246

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,458,069	+				+0.9
1,458,329	-		Pf6N2E2_1244	0.80	+0.9
1,458,409	-				+0.9
1,458,460	+				+0.9
1,458,515	+				+0.9
1,458,620	-		Pf6N2E2_1245	0.29	+0.9
1,458,625	+		Pf6N2E2_1245	0.30	-0.1
1,458,625	+		Pf6N2E2_1245	0.30	-2.4
1,458,625	+		Pf6N2E2_1245	0.30	-0.1
1,458,625	+		Pf6N2E2_1245	0.30	+0.9
1,458,625	+		Pf6N2E2_1245	0.30	-0.1
1,458,626	-		Pf6N2E2_1245	0.31	-0.1
1,458,626	-		Pf6N2E2_1245	0.31	+0.9
1,458,627	+		Pf6N2E2_1245	0.31	+0.9
1,458,627	+		Pf6N2E2_1245	0.31	+0.3
1,458,627	+		Pf6N2E2_1245	0.31	+0.9
1,458,627	+		Pf6N2E2_1245	0.31	-0.1
1,458,627	+		Pf6N2E2_1245	0.31	+0.9
1,458,628	-		Pf6N2E2_1245	0.31	-0.1
1,458,628	-		Pf6N2E2_1245	0.31	+0.9
1,458,628	-		Pf6N2E2_1245	0.31	+0.9
1,458,727	+		Pf6N2E2_1245	0.54	+0.9
1,458,728	-		Pf6N2E2_1245	0.54	+0.9
1,458,844	+		Pf6N2E2_1245	0.82	+0.9
1,458,845	-		Pf6N2E2_1245	0.82	+0.9
1,458,845	-		Pf6N2E2_1245	0.82	-0.1
1,458,847	+		Pf6N2E2_1245	0.82	+0.9
1,458,848	-		Pf6N2E2_1245	0.83	+0.9
1,458,848	-		Pf6N2E2_1245	0.83	-0.1
1,458,848	-		Pf6N2E2_1245	0.83	+0.9
1,458,850	+		Pf6N2E2_1245	0.83	-0.1
1,459,025	+		Pf6N2E2_1246	0.34	-1.1
1,459,026	-		Pf6N2E2_1246	0.35	-0.1
1,459,026	-		Pf6N2E2_1246	0.35	-0.1
1,459,155	+				+0.9
1,459,155	+				+0.9
1,459,204	-				+0.9
1,459,282	+		Pf6N2E2_1247	0.10	-0.7
1,459,282	+		Pf6N2E2_1247	0.10	+0.9
1,459,301	-		Pf6N2E2_1247	0.20	-0.6
1,459,301	-		Pf6N2E2_1247	0.20	+0.9
1,459,362	+		Pf6N2E2_1247	0.53	+0.9
1,459,362	+		Pf6N2E2_1247	0.53	+0.9
1,459,362	+		Pf6N2E2_1247	0.53	+0.9
1,459,362	+		Pf6N2E2_1247	0.53	+0.9
1,459,362	+		Pf6N2E2_1247	0.53	+0.9
1,459,363	-		Pf6N2E2_1247	0.54	+0.9
1,459,547	-				-0.5
1,459,547	-				-0.7
1,459,553	-				-1.5
1,459,593	+				-0.8
1,459,594	-				+0.9
1,459,594	-				+0.9
1,459,632	+				-2.5
1,459,652	+				-0.7
1,459,694	+				+0.9
1,459,694	+				+0.9
1,459,695	-				+0.9
1,459,695	-				+0.9
1,459,696	+				+0.9
1,459,696	+				+0.9
1,459,696	+				-0.1
1,459,697	-				-0.7
1,459,706	+				+0.9
1,459,706	+				-1.4
1,459,859	+		Pf6N2E2_1248	0.34	+0.9
1,459,860	-		Pf6N2E2_1248	0.35	+0.9
1,459,919	+		Pf6N2E2_1248	0.51	+0.9
1,459,919	+		Pf6N2E2_1248	0.51	+0.9
1,459,919	+				+0.9
1,460,094	+				-0.6
1,460,094	+				-0.1
1,460,094	+				+0.9
1,460,094	+				+0.9
1,460,094	+				-1.9
1,460,094	+				+0.9
1,460,124	-				+0.9
1,460,166	-				+0.9