Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1207

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
1,412,769	+				+0.9
1,412,931	+		Pf6N2E2_1206	0.24	+0.9
1,412,931	+		Pf6N2E2_1206	0.24	-1.4
1,412,931	+		Pf6N2E2_1206	0.24	-0.1
1,412,931	+		Pf6N2E2_1206	0.24	-0.7
1,412,932	-		Pf6N2E2_1206	0.24	+0.9
1,412,932	-		Pf6N2E2_1206	0.24	+0.9
1,413,166	-		Pf6N2E2_1206	0.55	-0.1
1,413,195	+		Pf6N2E2_1206	0.58	+0.9
1,413,195	+				-0.3
1,413,195	+		Pf6N2E2_1206	0.58	+0.9
1,413,195	+		Pf6N2E2_1206	0.58	+0.9
1,413,196	-		Pf6N2E2_1206	0.59	+0.9
1,413,196	-		Pf6N2E2_1206	0.59	+0.0
1,413,332	-		Pf6N2E2_1206	0.76	+0.9
1,413,372	-		Pf6N2E2_1206	0.82	+0.9
1,413,399	-		Pf6N2E2_1206	0.85	-0.1
1,413,496	+				+0.9
1,413,529	+				-0.1
1,413,585	+				+0.9
1,413,585	+				-0.9
1,413,585	+				+0.9
1,413,585	+				-0.1
1,413,585	+				+0.9
1,413,585	+				-1.6
1,413,586	-				+0.9
1,413,586	-				-0.7
1,413,656	+				-1.7
1,413,657	-				-0.7
1,413,824	+				+0.9
1,413,953	+		Pf6N2E2_1207	0.21	+0.9
1,413,954	-		Pf6N2E2_1207	0.21	-1.6
1,413,992	+		Pf6N2E2_1207	0.25	-1.2
1,414,169	+		Pf6N2E2_1207	0.41	+0.9
1,414,517	+		Pf6N2E2_1207	0.74	-1.9
1,414,575	-		Pf6N2E2_1207	0.79	-0.7
1,414,642	-		Pf6N2E2_1207	0.85	+0.9
1,414,860	-				+0.9
1,414,897	-				+0.9
1,414,992	-				-0.7
1,414,992	-				+0.9
1,415,115	+		Pf6N2E2_1208	0.19	-1.2
1,415,115	+		Pf6N2E2_1208	0.19	+0.9
1,415,174	+		Pf6N2E2_1208	0.23	+0.9
1,415,262	-		Pf6N2E2_1208	0.29	+0.9
1,415,381	+		Pf6N2E2_1208	0.38	-0.4
1,415,561	+		Pf6N2E2_1208	0.51	-0.6
1,415,562	-		Pf6N2E2_1208	0.51	-2.3
1,415,562	-		Pf6N2E2_1208	0.51	-1.1
1,415,562	-		Pf6N2E2_1208	0.51	-0.7
1,415,562	-		Pf6N2E2_1208	0.51	+0.9