Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_887

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,039,366	+				-0.5
1,039,366	+				+0.8
1,039,367	-				+0.8
1,039,552	-				+0.8
1,039,552	-				+0.8
1,039,556	-				-1.2
1,039,628	+				+0.8
1,039,628	+				+0.8
1,039,659	+				+0.8
1,039,659	+				+0.8
1,039,660	-				+0.8
1,039,705	+				-0.2
1,040,511	+				-0.8
1,040,576	+				-2.7
1,040,577	-				+0.8
1,040,751	-		Pf6N2E2_887	0.18	+0.8
1,040,875	+		Pf6N2E2_887	0.23	+0.8
1,040,875	+		Pf6N2E2_887	0.23	+0.8
1,040,875	+		Pf6N2E2_887	0.23	+0.8
1,040,875	+		Pf6N2E2_887	0.23	+0.8
1,040,876	-		Pf6N2E2_887	0.23	-2.0
1,040,877	+		Pf6N2E2_887	0.23	+0.8
1,040,957	-		Pf6N2E2_887	0.27	-0.2
1,040,991	+		Pf6N2E2_887	0.29	+0.8
1,040,991	+		Pf6N2E2_887	0.29	+0.8
1,040,991	+		Pf6N2E2_887	0.29	+0.8
1,040,991	+		Pf6N2E2_887	0.29	-0.2
1,040,995	+		Pf6N2E2_887	0.29	+0.8
1,040,995	+		Pf6N2E2_887	0.29	+0.8
1,040,995	+		Pf6N2E2_887	0.29	+0.8
1,040,995	+		Pf6N2E2_887	0.29	+0.8
1,040,995	+		Pf6N2E2_887	0.29	+0.2
1,040,995	+		Pf6N2E2_887	0.29	+0.8
1,040,995	+		Pf6N2E2_887	0.29	+0.8
1,040,995	+		Pf6N2E2_887	0.29	+0.8
1,040,996	-		Pf6N2E2_887	0.29	+0.8
1,040,996	-		Pf6N2E2_887	0.29	+0.8
1,040,996	-		Pf6N2E2_887	0.29	+0.8
1,041,016	+		Pf6N2E2_887	0.30	-0.5
1,041,016	+		Pf6N2E2_887	0.30	-1.3
1,041,016	+		Pf6N2E2_887	0.30	+0.8
1,041,117	-		Pf6N2E2_887	0.34	-2.2
1,041,137	+		Pf6N2E2_887	0.35	-0.2
1,041,276	+		Pf6N2E2_887	0.42	+0.8
1,041,276	+		Pf6N2E2_887	0.42	+0.8
1,041,286	+		Pf6N2E2_887	0.42	+0.8
1,041,378	+		Pf6N2E2_887	0.46	-3.0
1,041,392	+		Pf6N2E2_887	0.47	+0.8
1,041,392	+		Pf6N2E2_887	0.47	+0.8
1,041,392	+		Pf6N2E2_887	0.47	-1.3
1,041,392	+		Pf6N2E2_887	0.47	+0.8
1,041,392	+		Pf6N2E2_887	0.47	+0.8
1,041,393	-		Pf6N2E2_887	0.47	+0.8
1,041,393	-		Pf6N2E2_887	0.47	-0.2
1,041,425	+		Pf6N2E2_887	0.49	+0.8
1,041,467	+		Pf6N2E2_887	0.50	-1.2
1,041,467	+		Pf6N2E2_887	0.50	+0.8
1,041,467	+		Pf6N2E2_887	0.50	-0.2
1,041,468	-		Pf6N2E2_887	0.51	+0.8
1,041,486	+		Pf6N2E2_887	0.51	+0.8
1,041,487	-		Pf6N2E2_887	0.51	+0.8
1,041,549	+		Pf6N2E2_887	0.54	+0.8
1,041,596	+		Pf6N2E2_887	0.56	-1.2
1,041,615	+		Pf6N2E2_887	0.57	+0.8
1,041,618	+		Pf6N2E2_887	0.57	+0.8
1,041,715	+		Pf6N2E2_887	0.62	+0.8
1,041,815	+		Pf6N2E2_887	0.66	+0.8
1,041,884	+		Pf6N2E2_887	0.70	+0.8
1,041,884	+		Pf6N2E2_887	0.70	-3.0
1,041,888	+		Pf6N2E2_887	0.70	+0.8
1,041,889	-		Pf6N2E2_887	0.70	+0.8
1,041,890	+		Pf6N2E2_887	0.70	+0.8
1,041,938	-		Pf6N2E2_887	0.72	+0.8
1,042,112	+		Pf6N2E2_887	0.80	+0.8
1,042,112	+		Pf6N2E2_887	0.80	+0.8
1,042,113	-		Pf6N2E2_887	0.80	+0.8
1,042,113	-		Pf6N2E2_887	0.80	-0.8
1,042,160	-		Pf6N2E2_887	0.82	+0.8
1,042,371	-				-0.8
1,042,416	+				+0.8
1,042,416	+				+0.8
1,042,416	+				+0.8
1,042,417	-				-0.8
1,042,417	-				-0.2
1,042,417	-				+0.8
1,042,417	-				-0.8
1,042,447	+				-2.5
1,042,447	+				-2.7
1,042,447	+				+0.2
1,042,448	-				+0.8
1,042,448	-				+0.8
1,042,448	-				+0.8
1,042,450	+				-2.2
1,042,538	+				+0.8
1,042,539	-				-0.8
1,042,546	+				-1.9
1,042,547	-				+0.8
1,042,673	+				-0.2
1,042,733	+				-0.2
1,042,733	+				+0.8
1,042,734	-				-0.2
1,042,734	-				+0.8
1,043,279	-		Pf6N2E2_888	0.67	+0.8
1,043,301	+		Pf6N2E2_888	0.71	-0.2
1,043,302	-		Pf6N2E2_888	0.71	+0.8
1,043,355	+		Pf6N2E2_888	0.81	+0.8
1,043,355	+		Pf6N2E2_888	0.81	-2.4
1,043,355	+		Pf6N2E2_888	0.81	-0.8
1,043,407	-				+0.8
1,043,462	-				+0.8
1,043,462	-				+0.8