Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_885

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,034,448	+				+0.8
1,034,448	+				+0.8
1,034,448	+				-2.1
1,034,448	+				+0.8
1,034,448	+				+0.8
1,034,448	+				-0.2
1,034,448	+				+0.8
1,034,449	-				-0.2
1,034,525	+				+0.8
1,034,526	-				+0.8
1,034,677	-		Pf6N2E2_884	0.21	+0.8
1,034,677	-		Pf6N2E2_884	0.21	+0.8
1,034,698	+		Pf6N2E2_884	0.23	+0.8
1,034,698	+		Pf6N2E2_884	0.23	-0.2
1,034,781	+		Pf6N2E2_884	0.32	+0.8
1,034,781	+		Pf6N2E2_884	0.32	-3.4
1,034,781	+		Pf6N2E2_884	0.32	-0.2
1,034,782	-		Pf6N2E2_884	0.32	-1.1
1,034,782	-		Pf6N2E2_884	0.32	-0.2
1,034,888	+		Pf6N2E2_884	0.43	+0.8
1,034,889	-		Pf6N2E2_884	0.43	+0.8
1,034,914	-		Pf6N2E2_884	0.46	+0.8
1,034,981	+		Pf6N2E2_884	0.53	+0.8
1,034,981	+		Pf6N2E2_884	0.53	+0.8
1,034,981	+		Pf6N2E2_884	0.53	+0.8
1,034,982	-		Pf6N2E2_884	0.53	-0.8
1,035,002	+		Pf6N2E2_884	0.55	-0.2
1,035,002	+		Pf6N2E2_884	0.55	+0.8
1,035,003	-		Pf6N2E2_884	0.55	-0.2
1,035,438	+				-2.1
1,035,438	+				+0.8
1,035,438	+				-1.8
1,035,438	+				-0.2
1,035,439	-				-0.2
1,035,439	-				-1.8
1,035,623	-		Pf6N2E2_885	0.19	-0.2
1,035,666	-		Pf6N2E2_885	0.23	-1.1
1,035,702	+		Pf6N2E2_885	0.26	-0.2
1,035,703	-		Pf6N2E2_885	0.27	-1.2
1,035,703	-		Pf6N2E2_885	0.27	+0.8
1,035,703	-		Pf6N2E2_885	0.27	-0.2
1,035,703	-		Pf6N2E2_885	0.27	-1.2
1,035,703	-		Pf6N2E2_885	0.27	+0.8
1,035,703	-		Pf6N2E2_885	0.27	-0.8
1,035,706	+		Pf6N2E2_885	0.27	-1.4
1,035,897	-		Pf6N2E2_885	0.45	-0.2
1,035,897	-		Pf6N2E2_885	0.45	-0.2
1,035,897	-		Pf6N2E2_885	0.45	-1.2
1,035,897	-		Pf6N2E2_885	0.45	+0.8
1,035,949	-		Pf6N2E2_885	0.50	+0.8
1,035,988	+		Pf6N2E2_885	0.54	+0.8
1,035,989	-		Pf6N2E2_885	0.54	+1.8
1,035,989	-		Pf6N2E2_885	0.54	-0.2
1,035,989	-		Pf6N2E2_885	0.54	+0.2
1,036,028	-		Pf6N2E2_885	0.58	+0.8
1,036,028	-		Pf6N2E2_885	0.58	-0.2
1,036,028	-		Pf6N2E2_885	0.58	+0.8
1,036,064	+		Pf6N2E2_885	0.62	+0.8
1,036,065	-		Pf6N2E2_885	0.62	-0.2
1,036,450	+				-0.2
1,036,450	+				+0.8
1,036,450	+				+0.8
1,036,451	-				-2.7
1,036,458	+				+0.8
1,036,470	+				-2.7
1,036,470	+				+0.8
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				-0.2
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				-0.2
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				-1.2
1,036,537	+				-4.2
1,036,537	+				-0.2
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				-2.6
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				-2.5
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				+0.8
1,036,537	+				-0.2
1,036,538	-				-0.2
1,036,538	-				+0.8
1,036,538	-				+0.8
1,036,538	-				-0.8
1,036,538	-				-0.8
1,036,538	-				+0.8
1,036,538	-				-0.2
1,036,538	-				-0.8
1,036,538	-				+0.8
1,036,538	-				-1.8
1,036,547	+				+0.8
1,036,592	+				-0.2
1,036,592	+				+0.8
1,036,640	+				+0.8
1,036,644	-				+0.8
1,036,685	+				+0.8
1,036,730	-				-0.8
1,036,730	-				+0.8
1,036,757	+				+0.8
1,036,757	+				+0.8
1,036,757	+				+0.8
1,036,761	+				+0.8
1,036,761	+				-0.2
1,036,762	-				+0.8
1,036,762	-				+0.8
1,036,763	+				+0.8
1,036,763	+				+1.2
1,036,764	-				-0.6
1,036,764	-				-3.4
1,036,764	-				+0.8
1,036,770	+				+0.8
1,036,797	+				-2.8
1,036,797	+				-0.2
1,036,797	+				-2.2
1,036,798	-				+0.8
1,036,799	+				-1.4
1,036,960	+		Pf6N2E2_886	0.10	-1.8
1,036,961	-		Pf6N2E2_886	0.10	-0.2
1,037,098	-		Pf6N2E2_886	0.25	+0.8
1,037,100	+		Pf6N2E2_886	0.25	-0.3
1,037,100	+		Pf6N2E2_886	0.25	-2.1
1,037,100	+		Pf6N2E2_886	0.25	-0.2
1,037,101	-		Pf6N2E2_886	0.25	-2.0
1,037,101	-		Pf6N2E2_886	0.25	-0.2
1,037,101	-		Pf6N2E2_886	0.25	+0.8
1,037,101	-		Pf6N2E2_886	0.25	-0.2
1,037,101	-		Pf6N2E2_886	0.25	-2.2
1,037,101	-		Pf6N2E2_886	0.25	+0.8
1,037,101	-		Pf6N2E2_886	0.25	-1.8
1,037,186	-		Pf6N2E2_886	0.34	+0.8
1,037,186	-		Pf6N2E2_886	0.34	-2.1
1,037,186	-		Pf6N2E2_886	0.34	+0.8
1,037,285	+		Pf6N2E2_886	0.44	+0.8
1,037,285	+		Pf6N2E2_886	0.44	-0.2
1,037,292	+		Pf6N2E2_886	0.45	-0.8
1,037,293	-		Pf6N2E2_886	0.45	+0.8
1,037,293	-		Pf6N2E2_886	0.45	-0.2
1,037,357	+		Pf6N2E2_886	0.51	-0.2
1,037,358	-		Pf6N2E2_886	0.52	-0.2
1,037,358	-		Pf6N2E2_886	0.52	-1.7