Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_665

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
769,432	+		Pf6N2E2_664	0.45	+0.8
769,433	-		Pf6N2E2_664	0.45	-0.9
769,433	-		Pf6N2E2_664	0.45	-1.5
769,939	+				+0.8
770,155	-		Pf6N2E2_665	0.13	-0.2
770,155	-		Pf6N2E2_665	0.13	+0.8
770,289	+		Pf6N2E2_665	0.27	-2.6
770,289	+		Pf6N2E2_665	0.27	-2.0
770,290	-		Pf6N2E2_665	0.27	+0.8
770,560	-		Pf6N2E2_665	0.54	-0.8
770,934	+				+0.8
770,988	+				-0.8
770,989	-				-3.8
770,998	-				-0.2
771,028	+				-1.7
771,028	+				-1.2
771,029	-				+0.1
771,029	-				-0.2
771,378	+		Pf6N2E2_666	0.33	+0.8
771,379	-		Pf6N2E2_666	0.33	-0.2
771,379	-		Pf6N2E2_666	0.33	-0.2
771,506	-		Pf6N2E2_666	0.46	-0.8
771,506	-		Pf6N2E2_666	0.46	-0.2
771,526	-		Pf6N2E2_666	0.48	+0.8
771,601	-		Pf6N2E2_666	0.55	-0.2
771,633	+		Pf6N2E2_666	0.58	-0.7
771,633	+		Pf6N2E2_666	0.58	-0.0
771,776	-		Pf6N2E2_666	0.72	-2.2
771,884	+		Pf6N2E2_666	0.83	+0.8
771,993	+				-0.2
771,993	+				-0.2
771,993	+				+0.8
771,993	+				+0.8
771,993	+				-0.2
771,994	-				-1.8
771,994	-				+0.8
771,994	-				+0.8
771,994	-				+0.1
771,994	-				-2.1