Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5959

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
6,778,060	+				+0.0
6,778,061	-				+0.0
6,778,105	+				+1.0
6,778,105	+				+1.0
6,778,106	-				+1.0
6,778,106	-				+1.0
6,778,106	-				+0.0
6,778,106	-				+0.0
6,778,106	-				+1.0
6,778,106	-				+1.0
6,778,106	-				-2.3
6,778,106	-				+1.0
6,778,124	+				+0.0
6,778,205	+		Pf6N2E2_5959	0.14	-0.6
6,778,228	-		Pf6N2E2_5959	0.20	+0.0
6,778,236	+		Pf6N2E2_5959	0.23	+1.0
6,778,236	+		Pf6N2E2_5959	0.23	-2.4
6,778,236	+		Pf6N2E2_5959	0.23	-0.6
6,778,236	+		Pf6N2E2_5959	0.23	-1.3
6,778,237	-		Pf6N2E2_5959	0.23	-1.6
6,778,237	-		Pf6N2E2_5959	0.23	-3.6
6,778,237	-		Pf6N2E2_5959	0.23	+1.0
6,778,237	-		Pf6N2E2_5959	0.23	-1.3
6,778,287	+		Pf6N2E2_5959	0.37	+1.0
6,778,287	+		Pf6N2E2_5959	0.37	-2.1
6,778,287	+		Pf6N2E2_5959	0.37	-1.8
6,778,288	-		Pf6N2E2_5959	0.37	-1.3
6,778,288	-		Pf6N2E2_5959	0.37	+1.0
6,778,502	+				+1.0
6,778,502	+				+0.0
6,778,502	+				+1.0
6,778,502	+				+1.0
6,778,502	+				-0.6
6,778,503	-				-2.1
6,778,503	-				-0.6
6,778,509	+				+1.0
6,778,510	-				+0.0
6,778,522	+				+0.0
6,778,522	+				-1.8
6,778,522	+				-1.6
6,778,522	+				+1.0
6,778,522	+				-1.2
6,778,522	+				-0.9
6,778,523	-				+1.0
6,778,523	-				+0.0
6,778,523	-				+0.0
6,778,523	-				-1.9
6,778,523	-				+1.0
6,778,523	-				-1.5
6,778,523	-				-0.8
6,778,523	-				+1.0
6,778,523	-				+1.0
6,778,523	-				+0.0
6,778,530	+				+1.0
6,778,530	+				-1.6
6,778,530	+				-2.0
6,778,530	+				-2.3
6,778,531	-				-1.3
6,778,531	-				+1.0
6,778,531	-				-0.6
6,778,531	-				+1.0
6,778,820	+		Pf6N2E2_5960	0.37	-3.1
6,778,820	+		Pf6N2E2_5960	0.37	+1.0
6,778,820	+		Pf6N2E2_5960	0.37	-1.8
6,778,820	+		Pf6N2E2_5960	0.37	-1.5
6,778,821	-		Pf6N2E2_5960	0.37	-1.0
6,778,827	-		Pf6N2E2_5960	0.38	+1.0
6,778,827	-		Pf6N2E2_5960	0.38	-2.0
6,778,827	-		Pf6N2E2_5960	0.38	-0.6
6,779,036	+		Pf6N2E2_5960	0.65	-1.2
6,779,036	+		Pf6N2E2_5960	0.65	-0.6
6,779,037	-		Pf6N2E2_5960	0.65	+1.0
6,779,039	+		Pf6N2E2_5960	0.65	+0.0
6,779,039	+		Pf6N2E2_5960	0.65	+1.0
6,779,039	+		Pf6N2E2_5960	0.65	-1.1
6,779,040	-		Pf6N2E2_5960	0.65	-1.0
6,779,040	-		Pf6N2E2_5960	0.65	+1.0
6,779,144	+		Pf6N2E2_5960	0.78	+0.0
6,779,144	+		Pf6N2E2_5960	0.78	+1.0
6,779,145	-		Pf6N2E2_5960	0.78	-0.8
6,779,189	+		Pf6N2E2_5960	0.84	+0.0
6,779,189	+		Pf6N2E2_5960	0.84	-1.7
6,779,189	+		Pf6N2E2_5960	0.84	+0.0
6,779,189	+		Pf6N2E2_5960	0.84	-1.8
6,779,189	+		Pf6N2E2_5960	0.84	-1.4
6,779,189	+		Pf6N2E2_5960	0.84	+1.0
6,779,189	+		Pf6N2E2_5960	0.84	+1.0
6,779,189	+		Pf6N2E2_5960	0.84	+1.0
6,779,189	+		Pf6N2E2_5960	0.84	-2.0
6,779,190	-		Pf6N2E2_5960	0.84	+1.0
6,779,190	-		Pf6N2E2_5960	0.84	+1.0
6,779,190	-		Pf6N2E2_5960	0.84	+0.0
6,779,190	-		Pf6N2E2_5960	0.84	+1.0
6,779,190	-		Pf6N2E2_5960	0.84	+1.0
6,779,190	-		Pf6N2E2_5960	0.84	+1.0
6,779,193	+		Pf6N2E2_5960	0.84	+1.0
6,779,193	+		Pf6N2E2_5960	0.84	+0.0
6,779,193	+		Pf6N2E2_5960	0.84	+1.0
6,779,194	-		Pf6N2E2_5960	0.84	-3.2
6,779,237	+		Pf6N2E2_5960	0.90	-1.0
6,779,237	+		Pf6N2E2_5960	0.90	-3.1
6,779,238	-				-2.3
6,779,378	-				-1.0
6,779,378	-				-2.8
6,779,378	-				+0.0
6,779,403	+				+1.0
6,779,404	-				-1.3
6,779,453	+				+0.0
6,779,453	+				+0.0
6,779,454	-				+1.0
6,779,454	-				+0.0
6,779,454	-				-1.3
6,779,454	-				+1.0
6,779,454	-				+1.0
6,779,463	+				+1.0
6,779,463	+				+1.0
6,779,463	+				+1.0
6,779,463	+				+1.0
6,779,463	+				+1.0
6,779,464	-				-0.5