Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5030

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
5,796,514	-		Pf6N2E2_5028	0.20	+1.2
5,796,524	+		Pf6N2E2_5028	0.22	+1.2
5,796,570	+		Pf6N2E2_5028	0.30	+1.2
5,796,632	+		Pf6N2E2_5028	0.41	+1.2
5,796,633	-		Pf6N2E2_5028	0.41	+1.2
5,796,633	-		Pf6N2E2_5028	0.41	-1.8
5,796,633	-		Pf6N2E2_5028	0.41	+1.2
5,796,784	+		Pf6N2E2_5028	0.68	+1.2
5,796,960	+				+1.2
5,796,960	+				+1.2
5,796,960	+				-1.1
5,796,960	+				+1.2
5,796,960	+				+0.2
5,796,960	+				-0.5
5,796,961	-				+1.2
5,796,961	-				+0.2
5,796,962	+				-0.8
5,796,962	+				-0.4
5,796,962	+				+1.2
5,796,963	-				-0.8
5,796,963	-				+1.2
5,797,211	+				+1.2
5,797,212	-				+1.2
5,797,213	+				+0.2
5,797,213	+				+1.2
5,797,213	+				+1.2
5,797,214	-				+1.2
5,797,562	-		Pf6N2E2_5030	0.33	-1.2
5,797,674	+		Pf6N2E2_5030	0.56	-0.4
5,797,674	+		Pf6N2E2_5030	0.56	-1.2
5,797,674	+		Pf6N2E2_5030	0.56	+0.2
5,797,675	-		Pf6N2E2_5030	0.56	-0.4
5,797,675	-		Pf6N2E2_5030	0.56	-2.0
5,797,675	-		Pf6N2E2_5030	0.56	+0.2
5,797,675	-		Pf6N2E2_5030	0.56	+1.2
5,797,675	-		Pf6N2E2_5030	0.56	-2.6
5,797,675	-		Pf6N2E2_5030	0.56	-1.6
5,797,678	+		Pf6N2E2_5030	0.57	+1.2
5,797,679	-		Pf6N2E2_5030	0.57	-3.8
5,797,738	+		Pf6N2E2_5030	0.70	-2.0
5,797,739	-		Pf6N2E2_5030	0.70	-0.4
5,797,739	-		Pf6N2E2_5030	0.70	-1.8
5,797,919	-				-0.4
5,797,922	+				-3.7
5,798,002	+				+1.2
5,798,002	+				+1.2
5,798,003	-				+1.2
5,798,142	+				-1.7
5,798,143	-				+1.2
5,798,143	-				+0.2
5,798,197	+				-1.0
5,798,197	+				-1.2
5,798,198	-				+4.2
5,798,198	-				+4.5
5,798,435	+		Pf6N2E2_5031	0.32	+0.2
5,798,436	-		Pf6N2E2_5031	0.32	+1.2
5,798,519	+		Pf6N2E2_5031	0.44	+0.2
5,798,520	-		Pf6N2E2_5031	0.44	+1.2
5,798,637	-		Pf6N2E2_5031	0.61	-0.8
5,798,637	-		Pf6N2E2_5031	0.61	-0.8
5,798,684	+		Pf6N2E2_5031	0.68	-2.3
5,798,684	+		Pf6N2E2_5031	0.68	-0.7
5,798,685	-		Pf6N2E2_5031	0.68	+1.2
5,798,695	+		Pf6N2E2_5031	0.70	+1.2
5,798,695	+		Pf6N2E2_5031	0.70	+0.4
5,798,696	-		Pf6N2E2_5031	0.70	-1.2
5,798,814	-		Pf6N2E2_5031	0.87	+0.2
5,798,814	-		Pf6N2E2_5031	0.87	-1.1
5,798,817	+		Pf6N2E2_5031	0.88	+1.2
5,798,818	-		Pf6N2E2_5031	0.88	-0.6
5,798,873	+				-0.8
5,798,874	-				-0.4
5,798,874	-				+1.2