Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4914

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
5,669,250	+				+0.2
5,669,250	+				+1.2
5,669,250	+				+1.2
5,669,250	+				+1.2
5,669,250	+				+1.2
5,669,251	-				+1.2
5,669,282	+				-1.6
5,669,283	-				-0.8
5,669,283	-				+1.2
5,669,299	+				+0.2
5,669,416	+				-2.0
5,669,416	+				+0.2
5,669,417	-				-0.4
5,669,417	-				+1.2
5,669,420	+				-1.6
5,669,420	+				+1.2
5,669,420	+				+1.2
5,669,420	+				-0.8
5,669,420	+				-2.0
5,669,421	-				-1.1
5,669,421	-				+1.2
5,669,421	-				+0.2
5,669,488	+		Pf6N2E2_4913	0.12	+0.4
5,669,488	+		Pf6N2E2_4913	0.12	-1.3
5,669,488	+		Pf6N2E2_4913	0.12	-1.1
5,669,489	-		Pf6N2E2_4913	0.12	-1.0
5,669,489	-		Pf6N2E2_4913	0.12	+0.2
5,669,579	+		Pf6N2E2_4913	0.28	+1.2
5,669,728	+		Pf6N2E2_4913	0.53	-1.3
5,669,729	-		Pf6N2E2_4913	0.54	-1.0
5,669,729	-		Pf6N2E2_4913	0.54	+1.2
5,670,022	-				-1.6
5,670,101	+				+1.2
5,670,102	-				-1.4
5,670,102	-				+1.2
5,670,102	-				+0.2
5,670,431	+		Pf6N2E2_4914	0.80	+1.2
5,670,431	+		Pf6N2E2_4914	0.80	-1.1
5,670,432	-		Pf6N2E2_4914	0.80	+1.2
5,670,432	-		Pf6N2E2_4914	0.80	-1.7
5,670,457	+		Pf6N2E2_4914	0.86	+0.2
5,670,457	+		Pf6N2E2_4914	0.86	+0.2
5,670,458	-		Pf6N2E2_4914	0.87	-2.0
5,670,458	-		Pf6N2E2_4914	0.87	-0.8
5,670,458	-		Pf6N2E2_4914	0.87	-0.4
5,670,487	+				+1.2
5,670,487	+				+0.2
5,670,487	+				-1.5
5,670,488	-				-1.1
5,670,547	+				-1.6
5,670,550	+				-0.3
5,670,550	+				-0.8
5,670,550	+				+0.2
5,670,550	+				-1.3
5,670,551	-				+1.2
5,670,551	-				+0.2
5,670,551	-				+0.2
5,670,551	-				+0.2
5,670,551	-				-0.8
5,670,551	-				-0.8
5,670,551	-				+1.2
5,670,551	-				+1.2
5,670,551	-				+0.4
5,670,551	-				+1.2
5,670,577	+				-1.5
5,670,577	+				+1.2
5,670,577	+				+0.2
5,670,578	-				-1.8
5,670,655	+		Pf6N2E2_4915	0.12	-0.4
5,670,655	+		Pf6N2E2_4915	0.12	+1.2
5,670,656	-		Pf6N2E2_4915	0.13	+0.2
5,670,656	-		Pf6N2E2_4915	0.13	+1.2
5,670,706	+		Pf6N2E2_4915	0.18	-1.6
5,670,879	+		Pf6N2E2_4915	0.38	-1.6
5,670,879	+		Pf6N2E2_4915	0.38	-0.4
5,670,941	-		Pf6N2E2_4915	0.45	-0.8
5,671,255	+		Pf6N2E2_4915	0.81	-0.6
5,671,255	+		Pf6N2E2_4915	0.81	+0.2
5,671,255	+		Pf6N2E2_4915	0.81	-0.9
5,671,399	+				+1.2
5,671,399	+				+0.2
5,671,400	-				-0.4
5,671,400	-				-1.8
5,671,400	-				-1.9
5,671,430	+				-1.5
5,671,431	-				-1.8
5,671,452	+				+1.2
5,671,452	+				-1.6
5,671,452	+				+1.2
5,671,452	+				-1.3
5,671,452	+				+0.2
5,671,452	+				-0.4
5,671,452	+				-1.0
5,671,452	+				+0.2
5,671,452	+				+0.2
5,671,452	+				+1.2
5,671,452	+				+0.2
5,671,453	-				+1.2
5,671,453	-				-1.1
5,671,453	-				+0.2
5,671,453	-				+0.6
5,671,453	-				-0.4
5,671,453	-				-1.9
5,671,453	-				+1.2
5,671,453	-				-1.3
5,671,453	-				+1.2
5,671,453	-				+0.2
5,671,453	-				-1.8
5,671,453	-				-1.6
5,671,453	-				+0.2
5,671,454	+				+1.2
5,671,455	-				-2.3
5,671,455	-				-0.8