Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4841

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
5,599,418	+				-0.5
5,599,418	+				-0.6
5,599,418	+				+1.2
5,599,418	+				+0.2
5,599,418	+				+1.2
5,599,418	+				-0.8
5,599,418	+				+1.2
5,599,438	+				+1.2
5,599,438	+				-0.6
5,599,438	+				+0.2
5,599,737	+				+1.2
5,599,737	+				+1.2
5,599,779	+				+0.2
5,599,779	+				+1.2
5,599,780	-				-0.4
5,599,780	-				+1.2
5,599,780	-				+0.2
5,599,850	+				-2.2
5,599,850	+				+0.2
5,599,917	+		Pf6N2E2_4841	0.16	-3.7
5,599,917	+		Pf6N2E2_4841	0.16	-0.4
5,599,917	+		Pf6N2E2_4841	0.16	-1.0
5,599,917	+		Pf6N2E2_4841	0.16	-0.5
5,599,958	+		Pf6N2E2_4841	0.20	-0.4
5,599,958	+		Pf6N2E2_4841	0.20	-0.4
5,599,958	+		Pf6N2E2_4841	0.20	-2.7
5,599,958	+		Pf6N2E2_4841	0.20	+1.2
5,599,958	+		Pf6N2E2_4841	0.20	-2.8
5,599,974	+		Pf6N2E2_4841	0.21	-1.4
5,599,986	+		Pf6N2E2_4841	0.23	+0.2
5,599,993	+		Pf6N2E2_4841	0.23	+1.2
5,600,004	+		Pf6N2E2_4841	0.24	+0.2
5,601,540	+				+1.2
5,601,540	+				+0.2
5,601,583	+				-2.5
5,601,583	+				+0.2
5,601,583	+				-1.1
5,601,583	+				+0.2
5,601,583	+				-0.3
5,601,583	+				-1.7
5,601,584	-				+1.2
5,601,584	-				+1.2
5,601,586	+				-0.4
5,601,586	+				-0.4
5,601,586	+				-1.1
5,601,586	+				+0.2
5,601,586	+				+1.2
5,601,586	+				+1.2
5,601,587	-		Pf6N2E2_4843	0.10	-1.6
5,601,587	-		Pf6N2E2_4843	0.10	+1.2
5,601,646	+		Pf6N2E2_4843	0.23	+1.2
5,601,646	+		Pf6N2E2_4843	0.23	+1.2
5,601,718	-		Pf6N2E2_4843	0.39	-1.2
5,601,748	+		Pf6N2E2_4843	0.45	+0.5
5,601,748	+		Pf6N2E2_4843	0.45	-0.8
5,601,749	-		Pf6N2E2_4843	0.46	+1.2