Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4682

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
5,415,290	+		Pf6N2E2_4681	0.33	-0.4
5,415,290	+		Pf6N2E2_4681	0.33	-1.0
5,415,290	+		Pf6N2E2_4681	0.33	+0.2
5,415,290	+		Pf6N2E2_4681	0.33	-1.6
5,415,290	+		Pf6N2E2_4681	0.33	-2.4
5,415,290	+		Pf6N2E2_4681	0.33	-0.4
5,415,290	+		Pf6N2E2_4681	0.33	-1.1
5,415,290	+		Pf6N2E2_4681	0.33	+0.2
5,415,291	-		Pf6N2E2_4681	0.33	+0.2
5,415,291	-		Pf6N2E2_4681	0.33	+1.2
5,415,291	-		Pf6N2E2_4681	0.33	-0.4
5,415,332	+		Pf6N2E2_4681	0.37	+1.2
5,415,333	-		Pf6N2E2_4681	0.37	-1.4
5,415,883	-		Pf6N2E2_4681	0.83	+2.2
5,415,883	-		Pf6N2E2_4681	0.83	+1.2
5,416,044	+				+1.2
5,416,044	+				+1.2
5,416,044	+				+1.2
5,416,045	-				+1.2
5,416,045	-				+1.2
5,416,089	+				-3.5
5,416,089	+				-1.6
5,416,094	+				-1.6
5,416,094	+				-0.4
5,416,095	-				+1.2
5,416,140	+				-3.5
5,416,140	+				-0.4
5,416,140	+				-0.8
5,416,140	+				+0.2
5,416,141	-				+1.2
5,416,141	-				+1.2
5,416,281	-		Pf6N2E2_4682	0.24	-1.4
5,416,402	+		Pf6N2E2_4682	0.39	+1.2
5,416,402	+		Pf6N2E2_4682	0.39	+1.2
5,416,403	-		Pf6N2E2_4682	0.39	-3.1
5,416,499	-		Pf6N2E2_4682	0.50	+0.2
5,416,499	-		Pf6N2E2_4682	0.50	-3.2
5,416,552	+		Pf6N2E2_4682	0.57	+1.2
5,416,553	-		Pf6N2E2_4682	0.57	+1.2
5,416,553	-		Pf6N2E2_4682	0.57	-0.8
5,416,603	-		Pf6N2E2_4682	0.63	+0.2
5,416,701	+		Pf6N2E2_4682	0.74	+0.2
5,416,886	-				-0.8
5,416,899	+				+0.2
5,416,900	-				+1.2
5,416,913	+				+1.2
5,416,913	+				-1.8
5,416,913	+				+1.2
5,416,914	-				-0.4
5,416,914	-				+1.2
5,416,914	-				+0.2
5,416,914	-				+0.2
5,416,922	+				+0.2
5,416,922	+				+0.2
5,416,922	+				+1.2
5,416,947	+				+1.2
5,416,947	+				+1.2
5,416,947	+				+1.2
5,416,948	-				-1.1
5,416,948	-				-1.3
5,416,979	+				-0.8
5,416,979	+				-1.8
5,416,979	+				-0.4
5,416,979	+				+1.2
5,416,979	+				-1.3
5,416,979	+				+0.2
5,416,979	+				+0.2
5,416,980	-				-1.5
5,416,980	-				-0.4
5,416,980	-				-1.0
5,416,980	-				+1.2
5,416,980	-				-0.6
5,416,992	+				+0.2
5,416,992	+				+1.2
5,416,992	+				+0.2
5,417,033	-				-2.0
5,417,065	+				-0.4
5,417,072	+				+1.2
5,417,073	-				+1.2
5,417,073	-				+1.2
5,417,073	-				+1.2
5,417,220	+		Pf6N2E2_4683	0.24	-0.8
5,417,220	+		Pf6N2E2_4683	0.24	-0.4
5,417,220	+		Pf6N2E2_4683	0.24	+0.2
5,417,295	+		Pf6N2E2_4683	0.32	+1.2
5,417,296	-		Pf6N2E2_4683	0.32	+0.2
5,417,506	-		Pf6N2E2_4683	0.54	+1.2
5,417,571	+		Pf6N2E2_4683	0.61	-0.8
5,417,571	+		Pf6N2E2_4683	0.61	+1.2
5,417,572	-		Pf6N2E2_4683	0.61	+0.2
5,417,599	-		Pf6N2E2_4683	0.64	+0.2
5,417,599	-		Pf6N2E2_4683	0.64	-1.5
5,417,599	-		Pf6N2E2_4683	0.64	+0.2
5,417,599	-		Pf6N2E2_4683	0.64	-1.9
5,417,699	+		Pf6N2E2_4683	0.75	-2.0
5,417,699	+		Pf6N2E2_4683	0.75	+1.2
5,417,699	+		Pf6N2E2_4683	0.75	+0.2
5,417,699	+		Pf6N2E2_4683	0.75	-1.6
5,417,699	+		Pf6N2E2_4683	0.75	+0.2
5,417,699	+		Pf6N2E2_4683	0.75	+0.2
5,417,700	-		Pf6N2E2_4683	0.75	+0.2
5,417,733	+		Pf6N2E2_4683	0.78	+1.2
5,417,733	+		Pf6N2E2_4683	0.78	-0.6
5,417,733	+		Pf6N2E2_4683	0.78	+0.2
5,417,733	+		Pf6N2E2_4683	0.78	-1.4
5,417,733	+		Pf6N2E2_4683	0.78	-1.6
5,417,733	+		Pf6N2E2_4683	0.78	+1.2
5,417,733	+		Pf6N2E2_4683	0.78	+1.2
5,417,733	+		Pf6N2E2_4683	0.78	-1.5
5,417,734	-		Pf6N2E2_4683	0.78	-0.4
5,417,734	-		Pf6N2E2_4683	0.78	+1.2
5,417,734	-		Pf6N2E2_4683	0.78	+1.2