Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4417

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
5,149,523	+		Pf6N2E2_4415	0.89	+1.2
5,149,523	+		Pf6N2E2_4415	0.89	+1.2
5,149,523	+		Pf6N2E2_4415	0.89	+0.2
5,149,685	+				+1.2
5,149,720	+		Pf6N2E2_4416	0.13	-0.4
5,149,721	-		Pf6N2E2_4416	0.13	+0.2
5,150,040	+		Pf6N2E2_4416	0.49	+0.2
5,150,078	+		Pf6N2E2_4416	0.53	+1.2
5,150,079	-		Pf6N2E2_4416	0.53	+1.2
5,150,079	-		Pf6N2E2_4416	0.53	+1.2
5,150,253	-		Pf6N2E2_4416	0.73	+1.2
5,150,259	-		Pf6N2E2_4416	0.73	+1.2
5,150,509	-				+1.2
5,150,566	+				-2.1
5,150,566	+				+0.2
5,150,567	-				+1.2
5,150,599	+		Pf6N2E2_4417	0.13	+0.2
5,150,599	+		Pf6N2E2_4417	0.13	+1.2
5,150,600	-		Pf6N2E2_4417	0.14	-2.1
5,150,600	-		Pf6N2E2_4417	0.14	-2.1
5,150,600	-		Pf6N2E2_4417	0.14	-2.1
5,150,820	-		Pf6N2E2_4417	0.44	+1.2
5,150,979	+		Pf6N2E2_4417	0.66	+1.2
5,150,980	-		Pf6N2E2_4417	0.66	-3.9
5,150,980	-		Pf6N2E2_4417	0.66	-2.0
5,151,261	-				+1.2
5,151,262	+				-1.5
5,151,263	-				-0.6
5,151,263	-				+1.2
5,151,907	-		Pf6N2E2_4418	0.81	+1.2
5,152,054	-				+0.2