Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3952

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
4,592,217	+		Pf6N2E2_3951	0.43	-0.4
4,592,217	+		Pf6N2E2_3951	0.43	-0.8
4,592,217	+		Pf6N2E2_3951	0.43	-1.4
4,592,217	+		Pf6N2E2_3951	0.43	+0.2
4,592,218	-		Pf6N2E2_3951	0.43	+0.2
4,592,349	+		Pf6N2E2_3951	0.55	+0.9
4,592,349	+		Pf6N2E2_3951	0.55	+1.2
4,592,349	+		Pf6N2E2_3951	0.55	+1.2
4,592,349	+		Pf6N2E2_3951	0.55	+1.2
4,592,350	-		Pf6N2E2_3951	0.55	+1.2
4,592,350	-		Pf6N2E2_3951	0.55	-1.1
4,592,439	+		Pf6N2E2_3951	0.63	+1.2
4,592,458	-		Pf6N2E2_3951	0.65	-1.6
4,592,801	+				+1.2
4,592,801	+				+1.2
4,592,802	-				+0.2
4,592,822	+				+0.2
4,592,823	-				-0.4
4,592,867	+				+1.2
4,592,876	-				+1.2
4,592,876	-				-0.8
4,592,876	-				+0.2
4,592,876	-				+1.2
4,592,876	-				+0.2
4,592,901	+				-0.4
4,592,901	+				+0.2
4,592,901	+				+1.2
4,592,901	+				-0.4
4,592,901	+				-0.4
4,592,902	-				+1.2
4,592,902	-				-0.8
4,592,902	-				+0.2
4,592,902	-				-0.4
4,592,902	-				-2.1
4,592,920	+				+1.2
4,592,921	-				-1.4
4,593,017	-				+0.2
4,593,017	-				+0.2
4,593,017	-				+0.2
4,593,038	+				+1.2
4,593,304	+		Pf6N2E2_3952	0.27	-1.4
4,593,305	-		Pf6N2E2_3952	0.27	+1.2
4,593,305	-		Pf6N2E2_3952	0.27	-1.8
4,593,580	+		Pf6N2E2_3952	0.51	-0.4
4,593,580	+		Pf6N2E2_3952	0.51	-2.7
4,593,580	+		Pf6N2E2_3952	0.51	-1.8
4,593,580	+		Pf6N2E2_3952	0.51	+0.2
4,593,581	-		Pf6N2E2_3952	0.51	-3.3
4,593,581	-		Pf6N2E2_3952	0.51	+0.2
4,593,581	-		Pf6N2E2_3952	0.51	+0.2
4,593,581	-		Pf6N2E2_3952	0.51	-1.2
4,593,581	-		Pf6N2E2_3952	0.51	-2.0
4,593,863	-		Pf6N2E2_3952	0.75	+0.2
4,593,869	+		Pf6N2E2_3952	0.76	-0.4
4,594,195	+				-0.4
4,594,196	-				+1.2
4,594,227	-				+0.2
4,594,227	-				-0.7
4,594,300	+				-0.8
4,594,300	+				+0.2
4,594,300	+				+1.2
4,594,300	+				+0.2
4,594,301	-				-0.4
4,594,301	-				+1.2
4,594,408	+		Pf6N2E2_3953	0.17	-1.4
4,594,409	-		Pf6N2E2_3953	0.17	-0.4
4,594,409	-		Pf6N2E2_3953	0.17	-1.8
4,594,409	-		Pf6N2E2_3953	0.17	-1.2
4,594,409	-		Pf6N2E2_3953	0.17	+0.2
4,594,431	+		Pf6N2E2_3953	0.20	+0.2
4,594,454	+		Pf6N2E2_3953	0.23	-1.2
4,594,455	-		Pf6N2E2_3953	0.23	-1.2
4,594,474	+		Pf6N2E2_3953	0.26	+1.2
4,594,474	+		Pf6N2E2_3953	0.26	-1.5
4,594,474	+		Pf6N2E2_3953	0.26	-0.2
4,594,474	+		Pf6N2E2_3953	0.26	+0.2
4,594,474	+		Pf6N2E2_3953	0.26	-0.8
4,594,474	+		Pf6N2E2_3953	0.26	-2.2
4,594,475	-		Pf6N2E2_3953	0.26	+0.2
4,594,475	-		Pf6N2E2_3953	0.26	+0.2
4,594,475	-		Pf6N2E2_3953	0.26	-1.3
4,594,475	-		Pf6N2E2_3953	0.26	+1.2
4,594,475	-		Pf6N2E2_3953	0.26	-0.4
4,594,475	-		Pf6N2E2_3953	0.26	+0.2
4,594,475	-		Pf6N2E2_3953	0.26	+0.2
4,594,475	-		Pf6N2E2_3953	0.26	+1.2
4,594,475	-		Pf6N2E2_3953	0.26	-0.7
4,594,475	-		Pf6N2E2_3953	0.26	-1.2
4,594,475	-		Pf6N2E2_3953	0.26	+1.2
4,594,475	-		Pf6N2E2_3953	0.26	+0.2
4,594,475	-		Pf6N2E2_3953	0.26	+0.2
4,594,575	-		Pf6N2E2_3953	0.39	-1.7
4,594,720	+		Pf6N2E2_3953	0.57	+1.2
4,594,810	+		Pf6N2E2_3953	0.69	-1.8
4,594,811	-		Pf6N2E2_3953	0.69	-1.7
4,594,828	+		Pf6N2E2_3953	0.71	-1.2
4,594,828	+		Pf6N2E2_3953	0.71	+0.2
4,594,828	+		Pf6N2E2_3953	0.71	-0.5
4,594,829	-		Pf6N2E2_3953	0.71	+0.2
4,594,829	-		Pf6N2E2_3953	0.71	-1.2
4,594,829	-		Pf6N2E2_3953	0.71	-2.4
4,594,829	-		Pf6N2E2_3953	0.71	+0.2
4,594,829	-		Pf6N2E2_3953	0.71	-0.4
4,594,829	-		Pf6N2E2_3953	0.71	-0.4
4,594,829	-		Pf6N2E2_3953	0.71	+1.2
4,594,860	+		Pf6N2E2_3953	0.75	-1.8
4,594,860	+		Pf6N2E2_3953	0.75	+1.2
4,594,860	+		Pf6N2E2_3953	0.75	-1.6
4,594,860	+		Pf6N2E2_3953	0.75	-0.4
4,594,860	+		Pf6N2E2_3953	0.75	-1.2
4,594,861	-		Pf6N2E2_3953	0.75	-0.8
4,594,861	-		Pf6N2E2_3953	0.75	+1.2
4,594,877	-		Pf6N2E2_3953	0.77	+1.2