Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3399

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
3,942,076	+		Pf6N2E2_3398	0.41	+1.1
3,942,076	+		Pf6N2E2_3398	0.41	+1.1
3,942,076	+		Pf6N2E2_3398	0.41	+1.1
3,942,077	-		Pf6N2E2_3398	0.41	-2.2
3,942,077	-		Pf6N2E2_3398	0.41	-2.3
3,942,077	-		Pf6N2E2_3398	0.41	+1.1
3,942,077	-		Pf6N2E2_3398	0.41	+1.1
3,942,077	-		Pf6N2E2_3398	0.41	-1.5
3,942,177	+		Pf6N2E2_3398	0.46	+1.1
3,942,177	+		Pf6N2E2_3398	0.46	+1.1
3,942,177	+		Pf6N2E2_3398	0.46	+0.1
3,942,177	+		Pf6N2E2_3398	0.46	+1.1
3,942,177	+		Pf6N2E2_3398	0.46	-1.8
3,942,177	+		Pf6N2E2_3398	0.46	-0.5
3,942,178	-		Pf6N2E2_3398	0.47	+0.1
3,942,178	-		Pf6N2E2_3398	0.47	-2.4
3,942,178	-		Pf6N2E2_3398	0.47	+1.1
3,942,274	+		Pf6N2E2_3398	0.52	-0.5
3,942,275	-		Pf6N2E2_3398	0.52	+1.1
3,942,275	-		Pf6N2E2_3398	0.52	-2.6
3,942,374	+		Pf6N2E2_3398	0.58	+0.1
3,942,374	+		Pf6N2E2_3398	0.58	+1.1
3,942,374	+		Pf6N2E2_3398	0.58	+0.1
3,942,538	+		Pf6N2E2_3398	0.67	+1.1
3,942,538	+		Pf6N2E2_3398	0.67	+0.1
3,942,538	+		Pf6N2E2_3398	0.67	-0.5
3,942,539	-		Pf6N2E2_3398	0.67	+0.1
3,942,539	-		Pf6N2E2_3398	0.67	+0.1
3,942,539	-		Pf6N2E2_3398	0.67	-2.2
3,942,677	+		Pf6N2E2_3398	0.75	-0.5
3,942,677	+		Pf6N2E2_3398	0.75	+0.1
3,942,678	-		Pf6N2E2_3398	0.75	-0.8
3,942,678	-		Pf6N2E2_3398	0.75	+0.1
3,942,678	-		Pf6N2E2_3398	0.75	-0.5
3,942,678	-		Pf6N2E2_3398	0.75	+0.5
3,942,678	-		Pf6N2E2_3398	0.75	+1.1
3,942,704	+		Pf6N2E2_3398	0.77	+1.1
3,942,704	+		Pf6N2E2_3398	0.77	-0.5
3,942,725	+		Pf6N2E2_3398	0.78	-0.5
3,942,725	+		Pf6N2E2_3398	0.78	+1.1
3,942,725	+		Pf6N2E2_3398	0.78	+1.1
3,942,725	+		Pf6N2E2_3398	0.78	+1.1
3,942,725	+		Pf6N2E2_3398	0.78	-1.5
3,942,725	+		Pf6N2E2_3398	0.78	-0.5
3,942,725	+		Pf6N2E2_3398	0.78	+0.5
3,942,725	+		Pf6N2E2_3398	0.78	+1.1
3,942,725	+		Pf6N2E2_3398	0.78	+1.1
3,942,725	+		Pf6N2E2_3398	0.78	+0.1
3,942,726	-		Pf6N2E2_3398	0.78	-1.6
3,942,726	-		Pf6N2E2_3398	0.78	-1.2
3,942,726	-		Pf6N2E2_3398	0.78	-0.7
3,942,726	-		Pf6N2E2_3398	0.78	-0.9
3,942,726	-		Pf6N2E2_3398	0.78	+1.1
3,942,726	-		Pf6N2E2_3398	0.78	-0.6
3,942,726	-		Pf6N2E2_3398	0.78	+0.1
3,942,726	-		Pf6N2E2_3398	0.78	-0.9
3,942,967	+				+1.1
3,943,129	+				-1.2
3,943,129	+				-0.5
3,943,130	-				+0.1
3,943,132	+				+1.1
3,943,133	-				+1.1
3,943,214	+				+1.1
3,943,357	+		Pf6N2E2_3399	0.16	+2.1
3,943,357	+		Pf6N2E2_3399	0.16	-0.9
3,943,391	+		Pf6N2E2_3399	0.18	+1.1
3,943,392	-		Pf6N2E2_3399	0.18	+0.1
3,943,467	+		Pf6N2E2_3399	0.22	+1.1
3,943,467	+		Pf6N2E2_3399	0.22	-0.5
3,943,467	+		Pf6N2E2_3399	0.22	+0.1
3,943,475	+		Pf6N2E2_3399	0.23	+1.1
3,943,475	+		Pf6N2E2_3399	0.23	+1.1
3,943,475	+		Pf6N2E2_3399	0.23	-1.7
3,943,475	+		Pf6N2E2_3399	0.23	+0.5
3,943,476	-		Pf6N2E2_3399	0.23	+0.1
3,943,476	-		Pf6N2E2_3399	0.23	+1.1
3,943,539	+		Pf6N2E2_3399	0.27	+0.1
3,943,540	-		Pf6N2E2_3399	0.27	+1.1
3,943,546	+		Pf6N2E2_3399	0.27	+1.1
3,943,546	+		Pf6N2E2_3399	0.27	+1.1
3,943,566	+		Pf6N2E2_3399	0.28	+1.1
3,943,566	+		Pf6N2E2_3399	0.28	+0.1
3,943,649	+		Pf6N2E2_3399	0.33	+1.1
3,943,649	+		Pf6N2E2_3399	0.33	+0.1
3,943,649	+		Pf6N2E2_3399	0.33	+1.1
3,943,649	+		Pf6N2E2_3399	0.33	-1.2
3,943,650	-		Pf6N2E2_3399	0.33	+1.1
3,943,650	-		Pf6N2E2_3399	0.33	+1.1
3,943,650	-		Pf6N2E2_3399	0.33	+0.1
3,943,650	-		Pf6N2E2_3399	0.33	+0.1
3,943,650	-		Pf6N2E2_3399	0.33	+1.1
3,943,653	+		Pf6N2E2_3399	0.33	+1.1
3,943,732	+		Pf6N2E2_3399	0.38	+1.1
3,943,732	+		Pf6N2E2_3399	0.38	+0.1
3,943,733	-		Pf6N2E2_3399	0.38	+1.1
3,943,969	-		Pf6N2E2_3399	0.51	-0.9
3,943,969	-		Pf6N2E2_3399	0.51	-1.2
3,944,023	+		Pf6N2E2_3399	0.54	+1.1
3,944,023	+		Pf6N2E2_3399	0.54	+0.1
3,944,024	-		Pf6N2E2_3399	0.54	+1.1
3,944,024	-		Pf6N2E2_3399	0.54	+1.1
3,944,024	-		Pf6N2E2_3399	0.54	-1.7
3,944,024	-		Pf6N2E2_3399	0.54	+1.1
3,944,064	+		Pf6N2E2_3399	0.57	-2.3
3,944,064	+		Pf6N2E2_3399	0.57	+0.1
3,944,064	+		Pf6N2E2_3399	0.57	+1.1
3,944,065	-		Pf6N2E2_3399	0.57	+1.1
3,944,065	-		Pf6N2E2_3399	0.57	-1.9
3,944,065	-		Pf6N2E2_3399	0.57	-2.0
3,944,065	-		Pf6N2E2_3399	0.57	+0.1
3,944,065	-		Pf6N2E2_3399	0.57	-0.2
3,944,065	-		Pf6N2E2_3399	0.57	-2.0
3,944,065	-		Pf6N2E2_3399	0.57	+1.1
3,944,065	-		Pf6N2E2_3399	0.57	+1.1
3,944,097	+		Pf6N2E2_3399	0.59	-0.7
3,944,098	-		Pf6N2E2_3399	0.59	+1.1
3,944,205	+		Pf6N2E2_3399	0.65	+1.1
3,944,205	+		Pf6N2E2_3399	0.65	+1.1
3,944,237	+		Pf6N2E2_3399	0.67	-0.5
3,944,249	+		Pf6N2E2_3399	0.67	+0.1
3,944,249	+		Pf6N2E2_3399	0.67	-1.2
3,944,250	-		Pf6N2E2_3399	0.67	-1.5
3,944,250	-		Pf6N2E2_3399	0.67	-1.2
3,944,326	-		Pf6N2E2_3399	0.72	-0.9
3,944,381	+		Pf6N2E2_3399	0.75	+1.1
3,944,382	-		Pf6N2E2_3399	0.75	+1.1
3,944,382	-		Pf6N2E2_3399	0.75	+1.1
3,944,385	+		Pf6N2E2_3399	0.75	+1.1
3,944,385	+		Pf6N2E2_3399	0.75	-2.2
3,944,385	+		Pf6N2E2_3399	0.75	+0.1
3,944,385	+		Pf6N2E2_3399	0.75	-0.5
3,944,385	+		Pf6N2E2_3399	0.75	+1.1
3,944,386	-		Pf6N2E2_3399	0.75	-1.9
3,944,425	+		Pf6N2E2_3399	0.78	+1.1
3,944,425	+		Pf6N2E2_3399	0.78	+1.1
3,944,425	+		Pf6N2E2_3399	0.78	+0.1
3,944,442	+		Pf6N2E2_3399	0.79	+0.1
3,944,482	+		Pf6N2E2_3399	0.81	+1.1
3,944,482	+		Pf6N2E2_3399	0.81	-1.3
3,944,482	+		Pf6N2E2_3399	0.81	+0.1
3,944,482	+		Pf6N2E2_3399	0.81	-0.9
3,944,483	-		Pf6N2E2_3399	0.81	+0.1
3,944,490	+		Pf6N2E2_3399	0.81	+0.1
3,944,490	+		Pf6N2E2_3399	0.81	+1.1
3,944,490	+		Pf6N2E2_3399	0.81	-1.5
3,944,491	-		Pf6N2E2_3399	0.81	+1.1
3,944,491	-		Pf6N2E2_3399	0.81	+0.1
3,944,491	-		Pf6N2E2_3399	0.81	+1.1
3,944,491	-		Pf6N2E2_3399	0.81	-1.0
3,944,550	+		Pf6N2E2_3399	0.85	+0.1
3,944,550	+		Pf6N2E2_3399	0.85	+1.1
3,944,550	+		Pf6N2E2_3399	0.85	-1.3
3,944,551	-		Pf6N2E2_3399	0.85	-1.2
3,944,641	+		Pf6N2E2_3399	0.90	+0.1
3,944,641	+		Pf6N2E2_3399	0.90	+1.1
3,944,641	+		Pf6N2E2_3399	0.90	+1.1
3,944,641	+		Pf6N2E2_3399	0.90	+1.1
3,944,641	+		Pf6N2E2_3399	0.90	-0.9
3,944,642	-				+1.1
3,944,642	-				-0.9
3,944,642	-				+1.1
3,944,642	-				-1.3
3,944,642	-				+0.1
3,944,642	-				-0.5
3,944,642	-				+0.1
3,944,642	-				-2.6
3,944,642	-				+1.1
3,944,649	+				-2.6
3,944,649	+				+1.1
3,945,030	+		Pf6N2E2_3400	0.27	-1.9
3,945,030	+		Pf6N2E2_3400	0.27	+1.1
3,945,030	+		Pf6N2E2_3400	0.27	+1.1
3,945,030	+		Pf6N2E2_3400	0.27	+0.1
3,945,069	+		Pf6N2E2_3400	0.32	+0.1
3,945,070	-		Pf6N2E2_3400	0.32	-0.5
3,945,107	+		Pf6N2E2_3400	0.36	-1.7
3,945,107	+		Pf6N2E2_3400	0.36	+1.1
3,945,107	+		Pf6N2E2_3400	0.36	+1.1
3,945,107	+		Pf6N2E2_3400	0.36	-2.0
3,945,107	+		Pf6N2E2_3400	0.36	+1.1
3,945,107	+		Pf6N2E2_3400	0.36	+0.1
3,945,108	-		Pf6N2E2_3400	0.37	-0.9
3,945,214	+		Pf6N2E2_3400	0.50	+1.1
3,945,214	+		Pf6N2E2_3400	0.50	+0.1
3,945,223	+		Pf6N2E2_3400	0.51	-0.5
3,945,223	+		Pf6N2E2_3400	0.51	+1.1
3,945,223	+		Pf6N2E2_3400	0.51	+1.1
3,945,224	-		Pf6N2E2_3400	0.51	-2.2
3,945,224	-		Pf6N2E2_3400	0.51	+1.1
3,945,492	-		Pf6N2E2_3400	0.85	-2.0
3,945,492	-		Pf6N2E2_3400	0.85	-2.0
3,945,492	-		Pf6N2E2_3400	0.85	+1.1
3,945,495	+		Pf6N2E2_3400	0.85	+1.1
3,945,528	-		Pf6N2E2_3400	0.89	+1.1
3,945,561	-				+1.1
3,945,578	+				+0.1
3,945,580	+				+0.1
3,945,580	+				-0.9
3,945,581	-				-0.1
3,945,581	-				-1.7
3,945,624	+				-0.5
3,945,625	-				-2.2
3,945,625	-				+1.1
3,945,625	-				+0.1
3,945,632	+				+1.1
3,945,632	+				-1.3
3,945,632	+				+1.1
3,945,632	+				+1.1
3,945,633	-				+1.1
3,945,633	-				+0.1
3,945,633	-				+1.1
3,945,633	-				+0.1
3,945,633	-				-1.7
3,945,710	+				+1.1
3,945,733	+				+1.1
3,945,751	-				-1.6
3,945,751	-				-0.5
3,945,751	-				-0.5
3,945,751	-				+1.1
3,945,751	-				+1.1
3,945,784	-				+1.1