Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3233

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
3,736,640	+		Pf6N2E2_3232	0.13	-3.3
3,736,641	-		Pf6N2E2_3232	0.13	+0.1
3,736,707	-		Pf6N2E2_3232	0.19	-0.5
3,736,707	-		Pf6N2E2_3232	0.19	+1.1
3,736,811	+		Pf6N2E2_3232	0.29	+1.1
3,736,811	+		Pf6N2E2_3232	0.29	+0.1
3,736,812	-		Pf6N2E2_3232	0.29	+1.1
3,736,862	+		Pf6N2E2_3232	0.34	+2.1
3,736,862	+		Pf6N2E2_3232	0.34	+1.1
3,736,997	+		Pf6N2E2_3232	0.47	+1.1
3,736,997	+		Pf6N2E2_3232	0.47	-1.8
3,736,998	-		Pf6N2E2_3232	0.47	+0.1
3,736,998	-		Pf6N2E2_3232	0.47	+1.1
3,737,045	+		Pf6N2E2_3232	0.52	+0.1
3,737,045	+		Pf6N2E2_3232	0.52	+0.7
3,737,046	-		Pf6N2E2_3232	0.52	+1.1
3,737,046	-		Pf6N2E2_3232	0.52	-0.5
3,737,046	-		Pf6N2E2_3232	0.52	+1.1
3,737,046	-		Pf6N2E2_3232	0.52	+1.1
3,737,157	-		Pf6N2E2_3232	0.63	+1.1
3,737,357	+		Pf6N2E2_3232	0.82	+0.1
3,737,357	+		Pf6N2E2_3232	0.82	+0.1
3,737,357	+		Pf6N2E2_3232	0.82	+1.1
3,737,357	+		Pf6N2E2_3232	0.82	+1.1
3,737,358	-		Pf6N2E2_3232	0.82	+1.1
3,737,450	-				-2.0
3,737,450	-				+1.1
3,737,450	-				+1.1
3,737,592	+				-1.9
3,737,593	-				+1.1
3,737,593	-				-0.5
3,737,593	-				+1.1
3,737,634	+				-0.5
3,737,634	+				+1.1
3,737,634	+				+1.1
3,737,635	-				+1.1
3,737,635	-				+1.1
3,737,733	+				+1.1
3,737,815	+		Pf6N2E2_3233	0.15	+1.1
3,737,816	-		Pf6N2E2_3233	0.15	-1.3
3,737,868	+		Pf6N2E2_3233	0.18	+1.1
3,737,869	-		Pf6N2E2_3233	0.18	+1.1
3,737,964	+		Pf6N2E2_3233	0.24	-2.0
3,737,964	+		Pf6N2E2_3233	0.24	-3.7
3,737,964	+		Pf6N2E2_3233	0.24	+1.1
3,737,964	+		Pf6N2E2_3233	0.24	+0.1
3,738,210	+		Pf6N2E2_3233	0.39	+1.1
3,738,210	+		Pf6N2E2_3233	0.39	-1.2
3,738,211	-		Pf6N2E2_3233	0.39	+1.1
3,738,211	-		Pf6N2E2_3233	0.39	+1.1
3,738,318	+		Pf6N2E2_3233	0.46	-0.5
3,738,318	+		Pf6N2E2_3233	0.46	+1.1
3,738,318	+		Pf6N2E2_3233	0.46	-0.5
3,738,318	+		Pf6N2E2_3233	0.46	+1.1
3,738,318	+		Pf6N2E2_3233	0.46	+0.1
3,738,318	+		Pf6N2E2_3233	0.46	+0.1
3,738,319	-		Pf6N2E2_3233	0.46	+0.1
3,738,319	-		Pf6N2E2_3233	0.46	+1.1
3,738,321	+		Pf6N2E2_3233	0.46	+1.1
3,738,321	+		Pf6N2E2_3233	0.46	+1.7
3,738,322	-		Pf6N2E2_3233	0.46	-0.1
3,738,504	+		Pf6N2E2_3233	0.57	+1.1
3,738,505	-		Pf6N2E2_3233	0.57	+1.1
3,738,505	-		Pf6N2E2_3233	0.57	-1.7
3,739,003	-		Pf6N2E2_3233	0.88	+1.1
3,739,003	-		Pf6N2E2_3233	0.88	-0.5
3,739,146	+				+1.1
3,739,217	+				+1.1
3,739,217	+				+1.1
3,739,217	+				-1.4
3,739,217	+				+1.1
3,739,218	-				-0.9
3,739,218	-				-0.8
3,739,219	+				-0.5
3,739,219	+				-2.2
3,739,220	-				+0.1
3,739,220	-				-2.1
3,739,220	-				-1.2
3,739,220	-				+1.1
3,739,220	-				-0.5
3,739,223	+				+1.1
3,739,223	+				-0.9
3,739,223	+				-1.2
3,739,223	+				+1.1
3,739,223	+				+1.1
3,739,223	+				-0.5
3,739,225	+				+1.1
3,739,303	-				+1.1
3,739,305	-				+1.1
3,739,305	-				+1.1
3,739,305	-				-1.2
3,739,351	+				+1.1
3,739,352	-				+1.1
3,739,412	+		Pf6N2E2_3234	0.13	+0.1
3,739,412	+		Pf6N2E2_3234	0.13	+2.1
3,739,413	-		Pf6N2E2_3234	0.13	-1.5
3,739,445	+		Pf6N2E2_3234	0.16	+1.1
3,739,700	+		Pf6N2E2_3234	0.40	-0.9
3,739,700	+		Pf6N2E2_3234	0.40	-2.4
3,739,701	-		Pf6N2E2_3234	0.40	+0.1
3,739,701	-		Pf6N2E2_3234	0.40	+0.1
3,739,797	-		Pf6N2E2_3234	0.49	+1.1