Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2648

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
3,111,171	+				-0.0
3,111,300	+		Pf6N2E2_2647	0.42	-0.0
3,111,300	+		Pf6N2E2_2647	0.42	-2.0
3,111,300	+		Pf6N2E2_2647	0.42	-0.0
3,111,301	-		Pf6N2E2_2647	0.43	-0.0
3,111,301	-		Pf6N2E2_2647	0.43	-0.0
3,111,313	+		Pf6N2E2_2647	0.46	+1.0
3,111,313	+		Pf6N2E2_2647	0.46	-0.0
3,111,348	+		Pf6N2E2_2647	0.55	-0.0
3,111,349	-		Pf6N2E2_2647	0.55	-0.6
3,111,380	+		Pf6N2E2_2647	0.63	+1.0
3,111,387	+		Pf6N2E2_2647	0.64	+1.0
3,111,388	-		Pf6N2E2_2647	0.65	+1.0
3,111,388	-		Pf6N2E2_2647	0.65	+1.0
3,111,429	+		Pf6N2E2_2647	0.75	+1.0
3,111,492	+				+1.0
3,111,492	+				-0.5
3,111,492	+				-2.0
3,111,493	-				+1.0
3,111,493	-				-0.0
3,111,493	-				+1.0
3,111,493	-				+1.0
3,111,493	-				+1.0
3,111,494	+				-1.6
3,111,494	+				+1.0
3,111,495	-				-0.0
3,111,495	-				-1.4
3,111,495	-				+1.0
3,111,495	-				+1.0
3,111,655	-				-0.0
3,111,655	-				-2.1
3,111,853	+				+1.0
3,111,854	-				-1.9
3,111,854	-				+1.0
3,111,854	-				+1.0
3,111,895	-				-1.0
3,112,201	+				+1.0
3,112,201	+				-2.4
3,112,201	+				-0.0
3,112,201	+				-0.0
3,112,202	-				-1.6
3,112,202	-				-0.0
3,112,279	-				-1.1
3,112,279	-				+1.0
3,112,335	+				+2.0
3,112,394	+				+1.0
3,112,394	+				-1.0
3,112,394	+				-0.0
3,112,394	+				-1.1
3,112,395	-				+1.0
3,112,395	-				+1.0
3,112,395	-				-0.0
3,112,395	-				-0.6
3,112,395	-				+1.0
3,112,492	-				-0.6
3,112,545	+		Pf6N2E2_2648	0.10	-2.8
3,112,545	+		Pf6N2E2_2648	0.10	-0.0
3,112,587	+		Pf6N2E2_2648	0.11	-0.6
3,112,587	+		Pf6N2E2_2648	0.11	+1.0
3,112,587	+				+1.0
3,112,587	+		Pf6N2E2_2648	0.11	-0.0
3,112,611	+		Pf6N2E2_2648	0.11	-0.6
3,112,611	+		Pf6N2E2_2648	0.11	+1.0
3,112,611	+		Pf6N2E2_2648	0.11	-0.6
3,112,612	-		Pf6N2E2_2648	0.11	-0.6
3,112,612	-		Pf6N2E2_2648	0.11	-1.6
3,112,612	-		Pf6N2E2_2648	0.11	-2.4
3,112,612	-		Pf6N2E2_2648	0.11	+1.0
3,112,634	-		Pf6N2E2_2648	0.11	-0.0
3,112,747	-		Pf6N2E2_2648	0.13	-1.4
3,112,747	-		Pf6N2E2_2648	0.13	+1.0
3,112,847	-		Pf6N2E2_2648	0.14	-1.0
3,113,160	-		Pf6N2E2_2648	0.17	+1.0
3,113,160	-		Pf6N2E2_2648	0.17	-0.6
3,113,265	+		Pf6N2E2_2648	0.19	-0.0
3,113,265	+		Pf6N2E2_2648	0.19	-2.7
3,113,265	+		Pf6N2E2_2648	0.19	-0.0
3,113,265	+		Pf6N2E2_2648	0.19	+1.0
3,113,265	+		Pf6N2E2_2648	0.19	+0.3
3,113,265	+		Pf6N2E2_2648	0.19	+1.0
3,113,265	+		Pf6N2E2_2648	0.19	-2.0
3,113,266	-		Pf6N2E2_2648	0.19	-0.0
3,113,266	-		Pf6N2E2_2648	0.19	-0.0
3,113,415	+		Pf6N2E2_2648	0.20	+1.0
3,113,415	+		Pf6N2E2_2648	0.20	+1.0
3,113,415	+		Pf6N2E2_2648	0.20	-0.0
3,113,416	-		Pf6N2E2_2648	0.20	-0.0
3,113,416	-		Pf6N2E2_2648	0.20	-2.8
3,113,416	-		Pf6N2E2_2648	0.20	-0.0
3,113,421	+		Pf6N2E2_2648	0.20	+1.0
3,113,421	+		Pf6N2E2_2648	0.20	+1.0
3,113,421	+		Pf6N2E2_2648	0.20	+1.0
3,113,421	+		Pf6N2E2_2648	0.20	+0.2
3,113,421	+		Pf6N2E2_2648	0.20	+1.0
3,113,422	-		Pf6N2E2_2648	0.20	+1.0
3,113,422	-		Pf6N2E2_2648	0.20	-3.0
3,113,422	-		Pf6N2E2_2648	0.20	+1.0
3,113,422	-		Pf6N2E2_2648	0.20	-0.6
3,113,422	-		Pf6N2E2_2648	0.20	+1.0
3,113,422	-		Pf6N2E2_2648	0.20	-2.2
3,113,422	-		Pf6N2E2_2648	0.20	-2.7
3,113,422	-		Pf6N2E2_2648	0.20	-2.8
3,113,422	-		Pf6N2E2_2648	0.20	-0.0
3,113,601	+		Pf6N2E2_2648	0.23	-2.2
3,113,656	-		Pf6N2E2_2648	0.23	+1.0
3,113,826	+		Pf6N2E2_2648	0.25	-2.5
3,113,826	+		Pf6N2E2_2648	0.25	+1.0
3,113,826	+		Pf6N2E2_2648	0.25	-1.0
3,113,827	-		Pf6N2E2_2648	0.25	+1.0
3,113,827	-		Pf6N2E2_2648	0.25	-1.8
3,113,827	-		Pf6N2E2_2648	0.25	+1.0
3,113,827	-		Pf6N2E2_2648	0.25	-1.0
3,113,961	+		Pf6N2E2_2648	0.27	-1.8
3,113,961	+		Pf6N2E2_2648	0.27	-1.7
3,113,962	-		Pf6N2E2_2648	0.27	-0.0
3,113,962	-		Pf6N2E2_2648	0.27	-0.0
3,113,962	-		Pf6N2E2_2648	0.27	-0.6
3,114,123	+		Pf6N2E2_2648	0.29	+1.0
3,114,125	+		Pf6N2E2_2648	0.29	-0.0
3,114,125	+		Pf6N2E2_2648	0.29	-1.8
3,114,125	+		Pf6N2E2_2648	0.29	-0.0
3,114,125	+		Pf6N2E2_2648	0.29	+1.0
3,114,125	+		Pf6N2E2_2648	0.29	+1.0
3,114,126	-		Pf6N2E2_2648	0.29	-0.0
3,114,126	-		Pf6N2E2_2648	0.29	-0.0
3,114,126	-		Pf6N2E2_2648	0.29	-2.4
3,114,192	+		Pf6N2E2_2648	0.29	+1.0
3,114,192	+		Pf6N2E2_2648	0.29	+1.0
3,114,193	-		Pf6N2E2_2648	0.29	-2.1
3,114,267	+		Pf6N2E2_2648	0.30	-1.4
3,114,267	+		Pf6N2E2_2648	0.30	+1.0
3,114,267	+		Pf6N2E2_2648	0.30	+1.0
3,114,268	-		Pf6N2E2_2648	0.30	+1.0
3,114,274	-		Pf6N2E2_2648	0.30	-0.0
3,114,274	-		Pf6N2E2_2648	0.30	-0.0
3,114,274	-		Pf6N2E2_2648	0.30	-0.0
3,114,274	-		Pf6N2E2_2648	0.30	-3.0
3,114,672	+		Pf6N2E2_2648	0.35	+1.0
3,114,672	+				+1.0
3,114,672	+		Pf6N2E2_2648	0.35	-1.0
3,114,672	+		Pf6N2E2_2648	0.35	-0.6
3,114,672	+		Pf6N2E2_2648	0.35	+1.0
3,114,672	+		Pf6N2E2_2648	0.35	-2.1
3,114,988	-		Pf6N2E2_2648	0.39	+1.0
3,114,993	+		Pf6N2E2_2648	0.39	-1.6
3,114,993	+		Pf6N2E2_2648	0.39	+1.0
3,114,993	+		Pf6N2E2_2648	0.39	-2.1
3,115,026	+		Pf6N2E2_2648	0.39	+1.0
3,115,707	+		Pf6N2E2_2648	0.47	+1.0
3,115,707	+		Pf6N2E2_2648	0.47	-0.0
3,115,713	+		Pf6N2E2_2648	0.47	-1.1
3,115,713	+		Pf6N2E2_2648	0.47	+1.0
3,115,746	+		Pf6N2E2_2648	0.48	+1.0
3,115,746	+		Pf6N2E2_2648	0.48	+1.0
3,115,958	-		Pf6N2E2_2648	0.50	+1.0
3,115,958	-		Pf6N2E2_2648	0.50	-0.6
3,115,984	+		Pf6N2E2_2648	0.50	-2.0
3,116,019	+		Pf6N2E2_2648	0.51	+1.0
3,116,019	+		Pf6N2E2_2648	0.51	+1.0
3,116,019	+		Pf6N2E2_2648	0.51	+1.0
3,116,019	+		Pf6N2E2_2648	0.51	-0.6
3,116,019	+		Pf6N2E2_2648	0.51	-0.6
3,116,019	+		Pf6N2E2_2648	0.51	+1.0
3,116,020	-		Pf6N2E2_2648	0.51	-1.2
3,116,073	+		Pf6N2E2_2648	0.51	+1.0
3,116,112	+		Pf6N2E2_2648	0.52	+1.0
3,116,112	+		Pf6N2E2_2648	0.52	+1.0
3,116,113	-		Pf6N2E2_2648	0.52	+1.0
3,116,433	+		Pf6N2E2_2648	0.56	+1.0
3,116,433	+		Pf6N2E2_2648	0.56	-2.4
3,116,433	+		Pf6N2E2_2648	0.56	-0.0
3,116,433	+		Pf6N2E2_2648	0.56	-0.0
3,116,433	+		Pf6N2E2_2648	0.56	+1.0
3,116,433	+		Pf6N2E2_2648	0.56	-3.4
3,116,434	-		Pf6N2E2_2648	0.56	-2.1
3,116,434	-		Pf6N2E2_2648	0.56	+1.0
3,116,434	-		Pf6N2E2_2648	0.56	+1.0
3,116,434	-		Pf6N2E2_2648	0.56	+1.0
3,116,437	+		Pf6N2E2_2648	0.56	+1.0
3,116,437	+		Pf6N2E2_2648	0.56	-1.8
3,116,437	+		Pf6N2E2_2648	0.56	-0.4
3,116,437	+		Pf6N2E2_2648	0.56	-1.6
3,116,437	+		Pf6N2E2_2648	0.56	-1.0
3,116,437	+		Pf6N2E2_2648	0.56	+1.0
3,116,438	-		Pf6N2E2_2648	0.56	+1.0
3,116,438	-		Pf6N2E2_2648	0.56	-1.0
3,116,438	-		Pf6N2E2_2648	0.56	+1.0
3,116,438	-		Pf6N2E2_2648	0.56	+1.0
3,116,438	-		Pf6N2E2_2648	0.56	-0.0
3,116,438	-		Pf6N2E2_2648	0.56	-0.0
3,116,438	-		Pf6N2E2_2648	0.56	-0.0
3,116,438	-		Pf6N2E2_2648	0.56	-0.1
3,116,439	+		Pf6N2E2_2648	0.56	-0.0
3,116,439	+		Pf6N2E2_2648	0.56	-2.3
3,116,439	+		Pf6N2E2_2648	0.56	-0.6
3,116,439	+		Pf6N2E2_2648	0.56	-0.0
3,116,439	+		Pf6N2E2_2648	0.56	-0.3
3,116,439	+		Pf6N2E2_2648	0.56	+1.0
3,116,439	+		Pf6N2E2_2648	0.56	-3.4
3,116,439	+		Pf6N2E2_2648	0.56	+1.0
3,116,439	+		Pf6N2E2_2648	0.56	+1.0
3,116,440	-		Pf6N2E2_2648	0.56	-0.6
3,116,440	-		Pf6N2E2_2648	0.56	-1.8
3,116,440	-		Pf6N2E2_2648	0.56	-2.0
3,116,440	-		Pf6N2E2_2648	0.56	-0.0
3,116,467	-		Pf6N2E2_2648	0.56	+1.0
3,116,597	-		Pf6N2E2_2648	0.58	+1.0
3,117,118	+		Pf6N2E2_2648	0.64	-0.0
3,117,119	-		Pf6N2E2_2648	0.64	-0.6
3,117,171	+		Pf6N2E2_2648	0.64	-1.9
3,117,171	+		Pf6N2E2_2648	0.64	+1.0
3,117,171	+		Pf6N2E2_2648	0.64	-0.6
3,117,172	-		Pf6N2E2_2648	0.64	-0.0
3,117,172	-		Pf6N2E2_2648	0.64	-0.0
3,117,172	-		Pf6N2E2_2648	0.64	-0.0
3,117,178	-		Pf6N2E2_2648	0.64	+1.0
3,117,178	-		Pf6N2E2_2648	0.64	-0.0
3,117,910	-		Pf6N2E2_2648	0.73	-0.6
3,117,910	-		Pf6N2E2_2648	0.73	-0.0
3,117,910	-		Pf6N2E2_2648	0.73	+1.0
3,117,916	-		Pf6N2E2_2648	0.73	-1.7
3,117,916	-		Pf6N2E2_2648	0.73	-0.0
3,117,943	-		Pf6N2E2_2648	0.73	-0.0
3,117,961	+		Pf6N2E2_2648	0.73	-0.0
3,117,961	+		Pf6N2E2_2648	0.73	-0.6
3,117,961	+		Pf6N2E2_2648	0.73	-2.7
3,117,961	+		Pf6N2E2_2648	0.73	+1.0
3,117,962	-		Pf6N2E2_2648	0.74	-0.0
3,117,962	-		Pf6N2E2_2648	0.74	+1.0
3,117,962	-		Pf6N2E2_2648	0.74	-0.6
3,117,962	-		Pf6N2E2_2648	0.74	+1.0
3,117,962	-		Pf6N2E2_2648	0.74	+1.0
3,117,962	-		Pf6N2E2_2648	0.74	+1.0
3,117,962	-		Pf6N2E2_2648	0.74	+1.0
3,117,962	-		Pf6N2E2_2648	0.74	-1.8
3,117,962	-		Pf6N2E2_2648	0.74	+0.5
3,118,595	-		Pf6N2E2_2648	0.81	+1.0
3,118,647	+		Pf6N2E2_2648	0.82	-1.0
3,118,648	-		Pf6N2E2_2648	0.82	-0.0
3,118,648	-		Pf6N2E2_2648	0.82	-2.0
3,118,648	-		Pf6N2E2_2648	0.82	-2.2
3,118,653	+		Pf6N2E2_2648	0.82	-1.0
3,118,653	+		Pf6N2E2_2648	0.82	+1.0
3,118,653	+		Pf6N2E2_2648	0.82	-1.8
3,118,654	-		Pf6N2E2_2648	0.82	+1.0
3,118,680	+		Pf6N2E2_2648	0.82	-0.0
3,118,717	+		Pf6N2E2_2648	0.82	-0.7
3,119,067	+		Pf6N2E2_2648	0.86	-0.0
3,119,068	-		Pf6N2E2_2648	0.86	-0.0
3,119,068	-		Pf6N2E2_2648	0.86	+1.0
3,119,068	-		Pf6N2E2_2648	0.86	+1.0
3,119,068	-		Pf6N2E2_2648	0.86	+0.5
3,119,073	+		Pf6N2E2_2648	0.86	-2.0
3,119,073	+		Pf6N2E2_2648	0.86	-1.3
3,119,073	+		Pf6N2E2_2648	0.86	-1.8
3,119,073	+		Pf6N2E2_2648	0.86	-0.0
3,119,073	+		Pf6N2E2_2648	0.86	+1.0
3,119,074	-		Pf6N2E2_2648	0.86	-2.0
3,119,074	-		Pf6N2E2_2648	0.86	-0.6
3,119,074	-		Pf6N2E2_2648	0.86	-0.0
3,119,074	-		Pf6N2E2_2648	0.86	+1.0
3,119,074	-		Pf6N2E2_2648	0.86	-0.6
3,119,074	-		Pf6N2E2_2648	0.86	+1.0
3,119,074	-		Pf6N2E2_2648	0.86	-0.0
3,119,074	-		Pf6N2E2_2648	0.86	+1.0
3,119,074	-		Pf6N2E2_2648	0.86	+1.0
3,119,106	+		Pf6N2E2_2648	0.87	-0.6
3,119,107	-		Pf6N2E2_2648	0.87	+1.0
3,119,107	-		Pf6N2E2_2648	0.87	+1.0
3,119,192	+		Pf6N2E2_2648	0.88	-0.0
3,119,192	+		Pf6N2E2_2648	0.88	-0.6
3,119,193	-		Pf6N2E2_2648	0.88	+1.0
3,119,193	-		Pf6N2E2_2648	0.88	+1.0
3,119,193	-		Pf6N2E2_2648	0.88	-0.0
3,119,193	-		Pf6N2E2_2648	0.88	-0.0
3,119,261	+		Pf6N2E2_2648	0.89	-1.2
3,119,262	-		Pf6N2E2_2648	0.89	-2.2
3,119,397	+				+1.0
3,119,397	+				-3.4
3,119,397	+				+1.0
3,119,397	+				-0.8
3,119,397	+				-1.0
3,119,398	-				+1.0
3,119,398	-				+1.0
3,119,403	+				+1.0
3,119,403	+				+1.0
3,119,404	-				-0.0
3,120,130	-				-0.0
3,120,185	+				-0.6
3,120,186	-				+1.0
3,120,186	-				-2.2
3,120,186	-				+1.0
3,120,197	+				+1.0
3,120,198	-				-0.9
3,120,198	-				-1.8
3,120,459	-				-2.8
3,120,589	+				+1.0
3,120,589	+				-0.0
3,120,589	+				+1.0
3,120,590	-				-0.6
3,120,661	+				-0.0
3,120,719	+				-0.0
3,120,964	+		Pf6N2E2_2650	0.16	+1.0
3,120,964	+		Pf6N2E2_2650	0.16	+1.0
3,120,964	+		Pf6N2E2_2650	0.16	+1.0
3,120,964	+		Pf6N2E2_2650	0.16	-1.8
3,120,964	+		Pf6N2E2_2650	0.16	+1.0
3,120,964	+		Pf6N2E2_2650	0.16	-0.0
3,120,965	-		Pf6N2E2_2650	0.16	-3.3
3,120,965	-		Pf6N2E2_2650	0.16	-1.0
3,120,965	-		Pf6N2E2_2650	0.16	+1.0
3,120,965	-		Pf6N2E2_2650	0.16	-1.6
3,121,063	+		Pf6N2E2_2650	0.24	+1.0
3,121,064	-		Pf6N2E2_2650	0.24	+1.0
3,121,115	-		Pf6N2E2_2650	0.28	-2.4