Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2620

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
3,077,456	+		Pf6N2E2_2619	0.23	+0.9
3,077,456	+		Pf6N2E2_2619	0.23	+0.9
3,077,457	-		Pf6N2E2_2619	0.23	+0.9
3,077,457	-		Pf6N2E2_2619	0.23	-2.4
3,077,457	-		Pf6N2E2_2619	0.23	-0.1
3,077,457	-		Pf6N2E2_2619	0.23	-1.1
3,077,457	-		Pf6N2E2_2619	0.23	-1.7
3,077,459	-		Pf6N2E2_2619	0.24	-0.6
3,077,459	-		Pf6N2E2_2619	0.24	+0.9
3,077,459	-		Pf6N2E2_2619	0.24	-0.1
3,077,459	-		Pf6N2E2_2619	0.24	+0.9
3,077,481	+		Pf6N2E2_2619	0.26	-0.1
3,077,674	+		Pf6N2E2_2619	0.52	-0.1
3,077,674	+		Pf6N2E2_2619	0.52	+0.9
3,077,675	-		Pf6N2E2_2619	0.52	-2.6
3,077,788	+		Pf6N2E2_2619	0.67	-0.1
3,077,788	+		Pf6N2E2_2619	0.67	+0.9
3,077,788	+		Pf6N2E2_2619	0.67	-0.2
3,077,822	+		Pf6N2E2_2619	0.71	+0.9
3,077,823	-		Pf6N2E2_2619	0.72	+0.9
3,077,854	+		Pf6N2E2_2619	0.76	-1.1
3,077,854	+		Pf6N2E2_2619	0.76	+1.2
3,077,855	-		Pf6N2E2_2619	0.76	-0.1
3,077,881	+		Pf6N2E2_2619	0.79	+0.9
3,077,882	-		Pf6N2E2_2619	0.79	-0.1
3,077,891	-		Pf6N2E2_2619	0.81	-1.3
3,077,891	-		Pf6N2E2_2619	0.81	+0.9
3,077,891	-		Pf6N2E2_2619	0.81	-0.6
3,078,041	+				-0.4
3,078,042	-				+0.9
3,078,119	-				+1.0
3,078,170	-				-0.0
3,078,177	+				+1.0
3,078,178	-				+1.0
3,078,265	-				+1.0
3,078,282	-				+1.0
3,078,378	+		Pf6N2E2_2620	0.22	+1.0
3,078,378	+		Pf6N2E2_2620	0.22	-0.0
3,078,378	+		Pf6N2E2_2620	0.22	+1.0
3,078,378	+		Pf6N2E2_2620	0.22	-0.0
3,078,378	+		Pf6N2E2_2620	0.22	-3.1
3,078,378	+		Pf6N2E2_2620	0.22	-2.6
3,078,379	-		Pf6N2E2_2620	0.22	-0.0
3,078,379	-		Pf6N2E2_2620	0.22	-1.9
3,078,420	+		Pf6N2E2_2620	0.39	+1.0
3,078,421	-		Pf6N2E2_2620	0.39	+1.0
3,078,421	-		Pf6N2E2_2620	0.39	-1.0
3,078,424	+		Pf6N2E2_2620	0.41	-2.2
3,078,424	+		Pf6N2E2_2620	0.41	-2.2
3,078,496	+		Pf6N2E2_2620	0.69	-1.0
3,078,660	+				-1.0
3,078,661	-				-0.0
3,078,697	+				-0.0
3,078,697	+				+1.0
3,078,698	-				-2.1
3,078,698	-				+1.0
3,078,698	-				-0.0
3,078,698	-				-0.6
3,078,841	-				-0.3
3,079,052	+		Pf6N2E2_2621	0.13	+1.0
3,079,053	-		Pf6N2E2_2621	0.13	-2.2
3,079,053	-		Pf6N2E2_2621	0.13	-1.4
3,079,053	-		Pf6N2E2_2621	0.13	-0.6
3,079,144	+		Pf6N2E2_2621	0.16	-0.0
3,079,152	+		Pf6N2E2_2621	0.16	-0.0
3,079,297	+		Pf6N2E2_2621	0.20	-2.4
3,079,298	-		Pf6N2E2_2621	0.20	-2.3
3,079,298	-		Pf6N2E2_2621	0.20	-0.0
3,079,298	-		Pf6N2E2_2621	0.20	+1.0
3,079,298	-		Pf6N2E2_2621	0.20	-0.0
3,079,298	-		Pf6N2E2_2621	0.20	+1.0
3,079,298	-		Pf6N2E2_2621	0.20	-2.6
3,079,298	-		Pf6N2E2_2621	0.20	-2.1