Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2446

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
2,895,650	+		Pf6N2E2_2444	0.74	+0.9
2,895,650	+		Pf6N2E2_2444	0.74	-0.7
2,895,651	-		Pf6N2E2_2444	0.74	-1.4
2,895,797	+				-1.1
2,895,924	+				+0.9
2,896,214	+		Pf6N2E2_2445	0.46	-0.1
2,896,292	+		Pf6N2E2_2445	0.66	-0.1
2,896,292	+		Pf6N2E2_2445	0.66	-2.5
2,896,319	+		Pf6N2E2_2445	0.73	+0.9
2,896,319	+		Pf6N2E2_2445	0.73	-2.1
2,896,319	+		Pf6N2E2_2445	0.73	-0.1
2,896,319	+		Pf6N2E2_2445	0.73	-0.1
2,896,319	+		Pf6N2E2_2445	0.73	+0.9
2,896,320	-		Pf6N2E2_2445	0.73	-0.1
2,896,320	-		Pf6N2E2_2445	0.73	-4.3
2,896,320	-		Pf6N2E2_2445	0.73	-1.7
2,896,320	-		Pf6N2E2_2445	0.73	+0.9
2,896,320	-		Pf6N2E2_2445	0.73	-0.1
2,896,320	-		Pf6N2E2_2445	0.73	-0.1
2,896,320	-		Pf6N2E2_2445	0.73	-0.1
2,896,323	+		Pf6N2E2_2445	0.74	+0.9
2,896,367	+		Pf6N2E2_2445	0.85	+0.9
2,896,367	+		Pf6N2E2_2445	0.85	-0.1
2,896,368	-		Pf6N2E2_2445	0.85	-0.7
2,896,368	-		Pf6N2E2_2445	0.85	+0.9
2,896,368	-		Pf6N2E2_2445	0.85	+0.9
2,896,368	-				-2.1
2,896,368	-		Pf6N2E2_2445	0.85	-0.1
2,896,431	+				-2.4
2,896,487	+				+0.9
2,896,487	+				+0.9
2,896,487	+				-0.1
2,896,488	-				-0.1
2,896,488	-				+0.9
2,896,488	-				+0.9
2,896,488	-				-0.1
2,896,488	-				-1.7
2,896,488	-				-1.1
2,896,488	-				-0.1
2,896,488	-				-0.1
2,896,555	+				-0.1
2,896,555	+				+0.9
2,896,555	+				-0.1
2,896,556	-				-3.1
2,896,556	-				+0.9
2,896,556	-				-3.6
2,896,557	+				-0.7
2,896,557	+				-1.9
2,896,595	+				+0.9
2,896,607	+				-0.1
2,896,608	-				-2.9
2,896,608	-				-3.3
2,896,608	-				-3.3
2,896,608	-				-2.0
2,896,608	-				+0.9
2,896,686	-				-0.7
2,896,686	-				+0.9
2,896,845	-		Pf6N2E2_2446	0.16	-0.1
2,896,892	+		Pf6N2E2_2446	0.20	-0.1
2,896,892	+		Pf6N2E2_2446	0.20	-4.1
2,896,893	-		Pf6N2E2_2446	0.20	+0.9
2,896,893	-		Pf6N2E2_2446	0.20	+0.9
2,896,895	+		Pf6N2E2_2446	0.21	-2.7
2,896,937	+		Pf6N2E2_2446	0.24	-0.1
2,896,937	+		Pf6N2E2_2446	0.24	-0.1
2,896,937	+		Pf6N2E2_2446	0.24	-0.1
2,896,937	+		Pf6N2E2_2446	0.24	-3.5
2,896,937	+		Pf6N2E2_2446	0.24	-3.4
2,896,937	+		Pf6N2E2_2446	0.24	-2.0
2,896,937	+		Pf6N2E2_2446	0.24	+0.9
2,896,937	+		Pf6N2E2_2446	0.24	+0.9
2,896,937	+		Pf6N2E2_2446	0.24	-1.4
2,896,937	+		Pf6N2E2_2446	0.24	-3.2
2,896,938	-		Pf6N2E2_2446	0.24	+0.9
2,896,938	-		Pf6N2E2_2446	0.24	-0.1
2,896,938	-		Pf6N2E2_2446	0.24	-1.7
2,896,938	-		Pf6N2E2_2446	0.24	-2.5
2,896,938	-		Pf6N2E2_2446	0.24	-1.1
2,896,938	-		Pf6N2E2_2446	0.24	+0.9
2,896,938	-		Pf6N2E2_2446	0.24	+0.9
2,897,078	+		Pf6N2E2_2446	0.36	+0.9
2,897,078	+		Pf6N2E2_2446	0.36	-0.1
2,897,078	+		Pf6N2E2_2446	0.36	+0.9
2,897,078	+		Pf6N2E2_2446	0.36	+0.9
2,897,078	+		Pf6N2E2_2446	0.36	-0.1
2,897,079	-		Pf6N2E2_2446	0.36	-2.1
2,897,079	-		Pf6N2E2_2446	0.36	-0.1
2,897,079	-		Pf6N2E2_2446	0.36	-1.9
2,897,079	-		Pf6N2E2_2446	0.36	+0.9
2,897,195	+		Pf6N2E2_2446	0.45	-2.9
2,897,195	+		Pf6N2E2_2446	0.45	-4.2
2,897,196	-		Pf6N2E2_2446	0.45	+0.9
2,897,270	+		Pf6N2E2_2446	0.51	+0.9
2,897,271	-		Pf6N2E2_2446	0.52	+0.9
2,897,271	-		Pf6N2E2_2446	0.52	+0.9
2,897,271	-		Pf6N2E2_2446	0.52	+0.9
2,897,401	+		Pf6N2E2_2446	0.62	-0.1
2,897,401	+		Pf6N2E2_2446	0.62	+0.9
2,897,401	+		Pf6N2E2_2446	0.62	+0.9
2,897,401	+		Pf6N2E2_2446	0.62	+0.9
2,897,401	+		Pf6N2E2_2446	0.62	-0.1
2,897,432	+		Pf6N2E2_2446	0.65	+0.9
2,897,432	+		Pf6N2E2_2446	0.65	-3.4
2,897,433	-		Pf6N2E2_2446	0.65	-1.7
2,897,433	-		Pf6N2E2_2446	0.65	+0.9
2,897,433	-		Pf6N2E2_2446	0.65	-1.9
2,897,639	+		Pf6N2E2_2446	0.82	-1.3
2,897,639	+		Pf6N2E2_2446	0.82	-0.1
2,897,639	+		Pf6N2E2_2446	0.82	+0.9
2,897,639	+		Pf6N2E2_2446	0.82	+0.9
2,897,639	+		Pf6N2E2_2446	0.82	-0.1
2,897,856	-				-3.3
2,897,911	+				+0.9
2,897,911	+				+0.9
2,897,941	+				+0.9
2,897,941	+				+0.9
2,897,941	+				+0.9
2,897,942	-				-0.7
2,897,942	-				-2.7
2,897,942	-				-1.1
2,897,942	-				+0.9
2,897,942	-				-0.7
2,897,942	-				-2.0
2,897,942	-				-1.7
2,897,942	-				+0.9
2,897,942	-				-0.7
2,898,048	-				-0.7
2,898,048	-				+0.9
2,898,075	+				+0.9
2,898,075	+				-1.9
2,898,109	+				-0.7
2,898,109	+				-1.7
2,898,109	+				+0.9
2,898,109	+				+0.9
2,898,109	+				+0.9
2,898,109	+				+0.9
2,898,109	+				-0.1
2,898,109	+				+0.9
2,898,109	+				-0.1
2,898,110	-				-1.4
2,898,110	-				-1.1
2,898,110	-				-3.1
2,898,110	-				-0.7
2,898,110	-				-0.9
2,898,110	-				-1.1
2,898,110	-				-1.1
2,898,110	-				-2.5
2,898,110	-				-0.1
2,898,110	-				+0.9
2,898,110	-				-1.4
2,898,110	-				-0.1
2,898,110	-				-1.1
2,898,110	-				+0.9
2,898,110	-				-0.4
2,898,110	-				-1.1
2,898,110	-				-0.1
2,898,110	-				-2.6
2,898,110	-				+0.9
2,898,110	-				-2.8
2,898,110	-				+0.9
2,898,110	-				+0.9
2,898,110	-				+0.9
2,898,110	-				-0.1
2,898,111	+				+0.9
2,898,111	+				+0.9
2,898,111	+				-0.4
2,898,111	+				-0.1
2,898,111	+				+0.9
2,898,111	+				-0.1
2,898,111	+				+0.9
2,898,112	-				-0.1
2,898,112	-				-2.8
2,898,112	-				-0.1
2,898,112	-				+0.9
2,898,112	-				+0.9
2,898,112	-				-0.1
2,898,112	-				-0.7
2,898,112	-				+0.9
2,898,112	-				-2.6
2,898,112	-				-3.9
2,898,112	-				+0.9
2,898,112	-				-0.1
2,898,112	-				-2.4
2,898,113	+				-3.2
2,898,128	+				+0.9
2,898,129	-				-0.1
2,898,129	-				+0.9
2,898,129	-				-0.1
2,898,137	-				-0.7
2,898,189	+				+0.9
2,898,488	-		Pf6N2E2_2447	0.37	+0.9
2,898,751	+		Pf6N2E2_2447	0.67	+0.2
2,898,751	+		Pf6N2E2_2447	0.67	+0.9
2,898,751	+		Pf6N2E2_2447	0.67	-0.9
2,898,751	+		Pf6N2E2_2447	0.67	-3.0
2,898,752	-		Pf6N2E2_2447	0.67	-0.7
2,898,752	-		Pf6N2E2_2447	0.67	-3.2
2,898,752	-		Pf6N2E2_2447	0.67	-0.1