Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2092

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
2,487,336	+		Pf6N2E2_2091	0.31	+0.9
2,487,337	-		Pf6N2E2_2091	0.31	+0.9
2,487,337	-		Pf6N2E2_2091	0.31	+0.9
2,487,433	-		Pf6N2E2_2091	0.38	+0.9
2,487,433	-		Pf6N2E2_2091	0.38	+0.9
2,487,433	-		Pf6N2E2_2091	0.38	-1.4
2,487,544	-		Pf6N2E2_2091	0.46	-0.4
2,487,544	-		Pf6N2E2_2091	0.46	-0.1
2,487,731	+		Pf6N2E2_2091	0.59	+0.9
2,487,731	+		Pf6N2E2_2091	0.59	-0.1
2,487,732	-		Pf6N2E2_2091	0.59	-0.1
2,487,800	+		Pf6N2E2_2091	0.64	+0.9
2,487,801	-				+0.9
2,487,801	-		Pf6N2E2_2091	0.64	+0.9
2,487,813	+		Pf6N2E2_2091	0.65	-2.0
2,487,877	-		Pf6N2E2_2091	0.69	-0.1
2,488,290	+				-1.4
2,488,290	+				+0.9
2,488,291	-				-2.1
2,488,291	-				-0.1
2,488,291	-				+0.9
2,488,317	+				-0.7
2,488,317	+				+0.9
2,488,318	-				-0.1
2,488,318	-				-1.1
2,488,318	-				+0.9
2,488,321	+				-0.9
2,488,321	+				-0.1
2,488,321	+				+0.9
2,488,322	-				+0.9
2,488,322	-				-1.9
2,488,322	-				-1.1
2,488,324	+				-0.1
2,488,324	+				-0.7
2,488,325	-				+0.9
2,488,418	-		Pf6N2E2_2092	0.26	-0.7
2,488,538	+		Pf6N2E2_2092	0.58	-0.7
2,488,538	+		Pf6N2E2_2092	0.58	-0.1
2,488,538	+		Pf6N2E2_2092	0.58	+0.9
2,488,538	+		Pf6N2E2_2092	0.58	+0.9
2,488,539	-		Pf6N2E2_2092	0.58	-0.1
2,488,539	-		Pf6N2E2_2092	0.58	-2.4
2,488,539	-		Pf6N2E2_2092	0.58	+0.9
2,488,539	-		Pf6N2E2_2092	0.58	-0.1
2,488,539	-		Pf6N2E2_2092	0.58	-3.2
2,488,539	-		Pf6N2E2_2092	0.58	-1.6
2,488,547	-		Pf6N2E2_2092	0.60	-1.7
2,488,647	+		Pf6N2E2_2092	0.87	-0.7
2,488,694	+				+0.9
2,488,694	+				+0.9
2,488,694	+				+0.9
2,488,694	+				-1.4
2,488,695	-				-0.1
2,488,695	-				-0.1
2,488,695	-				-0.1
2,488,695	-				-0.7
2,488,758	+				-0.5
2,488,759	-				-3.0
2,488,759	-				+0.9
2,488,800	-				+0.9
2,488,800	-				+0.9
2,488,973	+				-2.6
2,489,029	+				-1.7
2,489,029	+				-0.1
2,489,029	+				+0.9
2,489,029	+				-1.7
2,489,030	-				+0.9
2,489,030	-				-1.4
2,489,089	+		Pf6N2E2_2093	0.12	+0.9
2,489,089	+		Pf6N2E2_2093	0.12	-2.8
2,489,089	+		Pf6N2E2_2093	0.12	+0.9
2,489,089	+		Pf6N2E2_2093	0.12	-0.7
2,489,152	+		Pf6N2E2_2093	0.19	-1.3
2,489,152	+		Pf6N2E2_2093	0.19	+0.9
2,489,152	+		Pf6N2E2_2093	0.19	-1.8
2,489,152	+		Pf6N2E2_2093	0.19	-1.6
2,489,152	+		Pf6N2E2_2093	0.19	-2.2
2,489,152	+		Pf6N2E2_2093	0.19	+0.9
2,489,152	+		Pf6N2E2_2093	0.19	+0.9
2,489,153	-		Pf6N2E2_2093	0.19	-2.0
2,489,153	-		Pf6N2E2_2093	0.19	-0.1
2,489,153	-		Pf6N2E2_2093	0.19	+0.9
2,489,153	-		Pf6N2E2_2093	0.19	-1.9
2,489,153	-		Pf6N2E2_2093	0.19	+0.9
2,489,153	-		Pf6N2E2_2093	0.19	+0.9
2,489,153	-		Pf6N2E2_2093	0.19	-2.7
2,489,296	+		Pf6N2E2_2093	0.35	-1.4
2,489,359	+		Pf6N2E2_2093	0.42	+0.9
2,489,359	+		Pf6N2E2_2093	0.42	+0.9
2,489,360	-		Pf6N2E2_2093	0.43	-0.1
2,489,375	-		Pf6N2E2_2093	0.44	-1.6
2,489,389	+		Pf6N2E2_2093	0.46	+0.9
2,489,389	+		Pf6N2E2_2093	0.46	+0.9