Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2042

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
2,430,559	-				-2.2
2,431,045	+		Pf6N2E2_2041	0.59	-0.7
2,431,046	-		Pf6N2E2_2041	0.59	-1.1
2,431,046	-		Pf6N2E2_2041	0.59	-2.2
2,431,046	-		Pf6N2E2_2041	0.59	+0.9
2,431,046	-		Pf6N2E2_2041	0.59	-0.1
2,431,046	-		Pf6N2E2_2041	0.59	+0.9
2,431,292	+				+0.9
2,431,293	-				+0.9
2,431,293	-				+0.9
2,431,293	-				-0.8
2,431,335	+				-3.1
2,431,336	-				+0.9
2,431,361	-				-0.1
2,431,498	+				+0.9
2,431,499	-				+0.9
2,431,502	+				-0.1
2,431,503	-				+0.9
2,431,503	-				-0.1
2,431,503	-				-0.7
2,431,503	-				+0.9
2,431,524	+				+0.9
2,431,524	+				-0.1
2,431,524	+				+0.9
2,431,525	-				+0.9
2,431,525	-				-0.9
2,431,525	-				+0.9
2,432,231	+		Pf6N2E2_2042	0.35	+0.9
2,432,232	-		Pf6N2E2_2042	0.35	-2.0
2,432,354	+		Pf6N2E2_2042	0.41	-0.7
2,432,354	+		Pf6N2E2_2042	0.41	+0.9
2,432,354	+		Pf6N2E2_2042	0.41	-0.7
2,432,354	+		Pf6N2E2_2042	0.41	-2.0
2,432,355	-		Pf6N2E2_2042	0.41	-0.1
2,432,355	-		Pf6N2E2_2042	0.41	+0.9
2,432,355	-		Pf6N2E2_2042	0.41	+0.9
2,432,364	-		Pf6N2E2_2042	0.41	-0.1
2,432,483	+		Pf6N2E2_2042	0.48	-0.1
2,432,484	-		Pf6N2E2_2042	0.48	-0.7
2,432,484	-		Pf6N2E2_2042	0.48	-2.1
2,432,484	-		Pf6N2E2_2042	0.48	-0.7
2,432,484	-		Pf6N2E2_2042	0.48	+0.9
2,432,486	+		Pf6N2E2_2042	0.48	-1.7
2,432,486	+		Pf6N2E2_2042	0.48	-0.1
2,432,487	-		Pf6N2E2_2042	0.48	+0.9
2,432,487	-		Pf6N2E2_2042	0.48	+0.9
2,432,559	-		Pf6N2E2_2042	0.51	-1.7
2,432,559	-		Pf6N2E2_2042	0.51	-1.4
2,432,749	+		Pf6N2E2_2042	0.61	+0.9
2,432,750	-		Pf6N2E2_2042	0.61	+0.9
2,432,750	-		Pf6N2E2_2042	0.61	+0.9
2,432,750	-		Pf6N2E2_2042	0.61	+0.9
2,432,753	+		Pf6N2E2_2042	0.61	+0.9
2,432,753	+		Pf6N2E2_2042	0.61	-0.1
2,432,753	+		Pf6N2E2_2042	0.61	-0.7
2,432,753	+		Pf6N2E2_2042	0.61	+0.9
2,432,753	+		Pf6N2E2_2042	0.61	+0.9
2,432,753	+		Pf6N2E2_2042	0.61	+0.9
2,432,754	-		Pf6N2E2_2042	0.61	-2.2
2,432,754	-		Pf6N2E2_2042	0.61	-2.1
2,432,754	-		Pf6N2E2_2042	0.61	-0.1
2,432,754	-		Pf6N2E2_2042	0.61	-0.7
2,432,754	-		Pf6N2E2_2042	0.61	-2.0
2,432,754	-		Pf6N2E2_2042	0.61	-0.1
2,432,759	+		Pf6N2E2_2042	0.62	-0.1
2,432,759	+		Pf6N2E2_2042	0.62	+0.9
2,432,759	+		Pf6N2E2_2042	0.62	-2.7
2,432,759	+		Pf6N2E2_2042	0.62	-1.4
2,432,759	+		Pf6N2E2_2042	0.62	+0.9
2,432,759	+		Pf6N2E2_2042	0.62	-0.1
2,432,760	-		Pf6N2E2_2042	0.62	+0.9
2,432,760	-		Pf6N2E2_2042	0.62	-0.4
2,432,760	-		Pf6N2E2_2042	0.62	+0.9
2,432,760	-		Pf6N2E2_2042	0.62	-1.7
2,432,760	-		Pf6N2E2_2042	0.62	-0.7
2,432,766	-		Pf6N2E2_2042	0.62	+0.9
2,433,029	+		Pf6N2E2_2042	0.75	-0.1
2,433,030	-		Pf6N2E2_2042	0.76	+0.9
2,433,030	-		Pf6N2E2_2042	0.76	-0.1
2,433,069	-		Pf6N2E2_2042	0.78	-1.4
2,433,367	+				-2.6
2,433,367	+				-2.2
2,433,368	-				-0.4
2,433,560	+				-1.6
2,433,614	+				+0.9
2,434,176	-		Pf6N2E2_2043	0.53	+0.9
2,434,177	+		Pf6N2E2_2043	0.53	+0.9
2,434,177	+		Pf6N2E2_2043	0.53	+0.9
2,434,177	+		Pf6N2E2_2043	0.53	-0.1
2,434,177	+		Pf6N2E2_2043	0.53	-1.1
2,434,178	-		Pf6N2E2_2043	0.53	-0.1
2,434,178	-		Pf6N2E2_2043	0.53	+0.9
2,434,178	-		Pf6N2E2_2043	0.53	-0.6
2,434,320	+		Pf6N2E2_2043	0.65	+0.9