Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1649

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,953,780	-				+0.8
1,953,889	+				+0.8
1,953,907	+		Pf6N2E2_1648	0.11	-1.2
1,953,908	-		Pf6N2E2_1648	0.11	-0.2
1,953,910	+		Pf6N2E2_1648	0.11	+9.8
1,953,910	+		Pf6N2E2_1648	0.11	+0.8
1,953,961	+		Pf6N2E2_1648	0.17	-0.8
1,953,991	+		Pf6N2E2_1648	0.21	-0.2
1,954,099	+		Pf6N2E2_1648	0.33	+9.4
1,954,225	+		Pf6N2E2_1648	0.48	+0.8
1,954,649	+				+0.8
1,954,941	-		Pf6N2E2_1649	0.22	+6.1
1,954,949	+		Pf6N2E2_1649	0.22	+0.8
1,955,255	+		Pf6N2E2_1649	0.49	-0.8
1,955,255	+		Pf6N2E2_1649	0.49	+0.8
1,955,255	+		Pf6N2E2_1649	0.49	+0.8
1,955,256	-		Pf6N2E2_1649	0.49	+0.8
1,955,355	-		Pf6N2E2_1649	0.57	+6.2
1,955,355	-		Pf6N2E2_1649	0.57	-0.2
1,955,613	-		Pf6N2E2_1649	0.80	+0.8
1,955,841	+				+9.5
1,955,841	+				-0.2
1,955,841	+				-0.2
1,955,842	-				+3.6
1,955,954	-				-1.3
1,956,031	+		Pf6N2E2_1650	0.13	+0.7
1,956,032	-		Pf6N2E2_1650	0.13	-2.6
1,956,032	-		Pf6N2E2_1650	0.13	+0.7
1,956,032	-		Pf6N2E2_1650	0.13	+0.7
1,956,070	+		Pf6N2E2_1650	0.15	+0.7
1,956,070	+		Pf6N2E2_1650	0.15	-2.3
1,956,071	-		Pf6N2E2_1650	0.15	-2.8
1,956,209	-		Pf6N2E2_1650	0.24	+0.7
1,956,508	+		Pf6N2E2_1650	0.44	+0.7
1,956,508	+		Pf6N2E2_1650	0.44	+0.7
1,956,509	-		Pf6N2E2_1650	0.44	+0.7
1,956,563	-		Pf6N2E2_1650	0.48	+0.7
1,956,563	-		Pf6N2E2_1650	0.48	+0.7
1,956,592	+		Pf6N2E2_1650	0.50	+0.7
1,956,610	+		Pf6N2E2_1650	0.51	+0.7
1,956,611	-		Pf6N2E2_1650	0.51	+0.7