Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1579

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,847,724	+				+0.7
1,847,747	-				+0.7
1,847,873	+				-1.5
1,847,873	+				-0.3
1,847,873	+				+0.7
1,847,873	+				-1.0
1,847,873	+				-0.4
1,847,874	-				+0.7
1,847,988	+				+0.7
1,848,057	-				-0.3
1,848,089	-				-0.3
1,848,089	-				-1.0
1,848,110	+				+0.7
1,848,110	+				-0.3
1,848,110	+				+0.7
1,848,116	+				-0.3
1,848,117	-				-3.6
1,848,117	-				+0.7
1,848,117	-				+0.7
1,848,158	+				+0.7
1,848,212	-				-2.3
1,848,219	+				+0.7
1,848,219	+				-0.3
1,848,219	+				+0.7
1,848,220	-				-1.2
1,848,220	-				-0.3
1,848,220	-				-2.2
1,848,256	+				+0.7
1,848,256	+				+0.7
1,848,257	-				+0.7
1,848,257	-				-0.3
1,848,272	+				-3.1
1,848,272	+				+0.7
1,848,272	+				-0.3
1,848,273	-				-0.2
1,848,273	-				+0.7
1,848,273	-				+0.7
1,848,273	-				+0.7
1,848,273	-				+0.7
1,848,273	-				-1.8
1,848,273	-				+0.7
1,848,276	+				-1.0
1,848,276	+				+0.7
1,848,277	-				+0.0
1,848,277	-				-1.5
1,848,277	-				-0.8
1,848,304	+				-0.3
1,848,304	+				-0.3
1,848,304	+				+0.7
1,848,304	+				-2.3
1,848,305	-				+0.7
1,848,305	-				-0.3
1,848,380	+				-0.8
1,848,381	-				+0.2
1,848,441	+		Pf6N2E2_1579	0.13	-0.8
1,848,441	+		Pf6N2E2_1579	0.13	-1.8
1,848,441	+		Pf6N2E2_1579	0.13	-0.3
1,848,441	+		Pf6N2E2_1579	0.13	-2.6
1,848,495	+		Pf6N2E2_1579	0.28	+0.7
1,848,499	-		Pf6N2E2_1579	0.29	+0.7
1,848,499	-		Pf6N2E2_1579	0.29	-1.6
1,848,499	-		Pf6N2E2_1579	0.29	-2.1
1,848,791	-				-2.2
1,848,791	-				+0.7
1,848,804	-				-2.4
1,848,904	+		Pf6N2E2_1580	0.11	-2.2
1,848,904	+		Pf6N2E2_1580	0.11	-0.3
1,848,904	+		Pf6N2E2_1580	0.11	-1.3
1,848,905	-		Pf6N2E2_1580	0.11	-0.3
1,848,905	-		Pf6N2E2_1580	0.11	+0.7
1,848,905	-		Pf6N2E2_1580	0.11	+0.3
1,848,905	-		Pf6N2E2_1580	0.11	-2.6
1,848,905	-		Pf6N2E2_1580	0.11	-1.5
1,848,905	-		Pf6N2E2_1580	0.11	-0.4
1,848,946	+		Pf6N2E2_1580	0.18	+0.7
1,848,946	+				+0.7
1,848,947	-		Pf6N2E2_1580	0.18	+0.7
1,848,953	+		Pf6N2E2_1580	0.19	+0.7
1,848,954	-		Pf6N2E2_1580	0.19	-0.3
1,848,954	-		Pf6N2E2_1580	0.19	+0.7
1,849,012	+		Pf6N2E2_1580	0.28	+0.7
1,849,012	+		Pf6N2E2_1580	0.28	-0.3
1,849,012	+		Pf6N2E2_1580	0.28	+0.7
1,849,013	-		Pf6N2E2_1580	0.28	+0.7
1,849,013	-		Pf6N2E2_1580	0.28	-2.9
1,849,282	+		Pf6N2E2_1580	0.72	+0.7
1,849,424	+				+0.7
1,849,426	+				-1.2
1,849,426	+				+0.7
1,849,426	+				-2.1
1,849,541	+				-0.3
1,849,541	+				-0.8
1,849,682	-				+0.7
1,849,691	-				-0.3