Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1454

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,701,299	+		Pf6N2E2_1453	0.71	+0.8
1,701,299	+		Pf6N2E2_1453	0.71	+0.8
1,701,549	-				+1.8
1,701,645	+				+0.8
1,701,671	-				+0.8
1,701,695	+				+0.8
1,701,755	-				+0.8
1,701,777	+				+0.8
1,701,777	+				+0.8
1,701,778	-				+0.8
1,701,801	+				+0.8
1,701,802	-				-0.8
1,701,802	-				-2.3
1,701,802	-				+0.8
1,701,870	+				-0.2
1,701,870	+				+0.8
1,701,934	-		Pf6N2E2_1454	0.11	-2.8
1,701,941	+		Pf6N2E2_1454	0.11	+0.8
1,701,942	-		Pf6N2E2_1454	0.11	-2.8
1,701,942	-		Pf6N2E2_1454	0.11	-2.2
1,702,083	+		Pf6N2E2_1454	0.22	+0.8
1,702,344	+		Pf6N2E2_1454	0.42	+0.8
1,702,344	+		Pf6N2E2_1454	0.42	-2.2
1,702,344	+		Pf6N2E2_1454	0.42	-0.2
1,702,524	+		Pf6N2E2_1454	0.55	-0.8
1,702,525	-		Pf6N2E2_1454	0.55	-0.2
1,702,622	+		Pf6N2E2_1454	0.63	+0.8
1,702,623	-		Pf6N2E2_1454	0.63	+0.8
1,702,758	+		Pf6N2E2_1454	0.73	+0.8
1,702,759	-		Pf6N2E2_1454	0.73	-0.8
1,703,099	+				+0.8
1,703,099	+				-1.5
1,703,100	-				+0.8
1,703,100	-				-0.2
1,703,103	+				+0.8
1,703,103	+				-0.2
1,703,103	+				-0.2
1,703,104	-				-1.6
1,703,144	+				-0.2
1,703,145	-				+0.8
1,703,145	-				+0.8
1,703,145	-				-0.2
1,703,145	-				-1.1
1,703,189	+				+0.8
1,703,198	-				+0.8
1,703,198	-				-0.8
1,703,242	+				+0.8
1,703,243	-				-0.2
1,703,243	-				+0.8
1,703,397	+		Pf6N2E2_1455	0.14	+0.8
1,703,397	+		Pf6N2E2_1455	0.14	+0.8
1,703,398	-		Pf6N2E2_1455	0.14	-0.2
1,703,398	-		Pf6N2E2_1455	0.14	-1.7
1,703,398	-		Pf6N2E2_1455	0.14	-0.2
1,703,595	+		Pf6N2E2_1455	0.34	+0.8
1,703,596	-		Pf6N2E2_1455	0.34	+0.8
1,703,631	+		Pf6N2E2_1455	0.37	-0.2
1,703,631	+		Pf6N2E2_1455	0.37	+0.8
1,703,632	-		Pf6N2E2_1455	0.37	+0.8
1,703,706	+		Pf6N2E2_1455	0.45	-1.6
1,703,706	+		Pf6N2E2_1455	0.45	+0.8
1,704,052	-		Pf6N2E2_1455	0.79	-1.4