Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1452

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,698,939	+				+0.8
1,699,049	-		Pf6N2E2_1451	0.21	+0.8
1,699,268	+		Pf6N2E2_1451	0.44	-0.2
1,699,268	+		Pf6N2E2_1451	0.44	+0.8
1,699,268	+		Pf6N2E2_1451	0.44	+0.8
1,699,268	+		Pf6N2E2_1451	0.44	+0.8
1,699,269	-		Pf6N2E2_1451	0.44	+0.8
1,699,336	+		Pf6N2E2_1451	0.51	+0.8
1,699,336	+		Pf6N2E2_1451	0.51	+0.8
1,699,337	-		Pf6N2E2_1451	0.51	-1.9
1,699,453	+		Pf6N2E2_1451	0.63	-0.8
1,699,453	+		Pf6N2E2_1451	0.63	+0.8
1,699,454	-		Pf6N2E2_1451	0.63	+0.8
1,699,457	+		Pf6N2E2_1451	0.63	+0.8
1,699,750	-				-0.2
1,699,750	-				-0.2
1,699,750	-				-1.4
1,699,750	-				-0.4
1,699,751	+				-1.9
1,699,752	-				+0.8
1,699,752	-				+0.8
1,699,752	-				-0.2
1,699,752	-				-2.4
1,699,753	+				-0.8
1,699,754	-				+0.8
1,699,754	-				-0.2
1,699,754	-				+0.8
1,699,754	-				+0.8
1,699,754	-				+0.0
1,699,763	-				-2.2
1,699,763	-				-0.2
1,699,852	+				-2.2
1,699,852	+				+0.8
1,699,853	-				-1.5
1,699,878	+				-0.2
1,699,878	+				-1.2
1,699,879	-				+0.8
1,699,879	-				-1.5
1,699,879	-				-1.2
1,699,879	-				+0.8
1,700,043	-		Pf6N2E2_1452	0.28	-3.8
1,700,132	-		Pf6N2E2_1452	0.45	-0.2
1,700,210	-		Pf6N2E2_1452	0.59	+0.8
1,700,239	+		Pf6N2E2_1452	0.64	+0.8
1,700,282	-		Pf6N2E2_1452	0.72	-0.2
1,700,351	-		Pf6N2E2_1452	0.85	-0.2
1,700,370	+		Pf6N2E2_1452	0.89	+0.8
1,700,386	-				+0.8
1,700,531	+				+0.8
1,700,531	+				+0.8
1,700,532	-				+0.8
1,700,532	-				-0.2
1,700,702	+		Pf6N2E2_1453	0.21	+0.8
1,700,702	+		Pf6N2E2_1453	0.21	+0.8
1,700,702	+		Pf6N2E2_1453	0.21	-1.1
1,700,703	-		Pf6N2E2_1453	0.21	+0.8
1,700,703	-		Pf6N2E2_1453	0.21	-2.2
1,700,741	+		Pf6N2E2_1453	0.24	+0.8
1,700,741	+		Pf6N2E2_1453	0.24	-0.2
1,700,774	+		Pf6N2E2_1453	0.27	-0.2
1,700,774	+		Pf6N2E2_1453	0.27	-3.0
1,700,774	+		Pf6N2E2_1453	0.27	+0.8
1,700,775	-		Pf6N2E2_1453	0.27	+0.8
1,700,775	-		Pf6N2E2_1453	0.27	-1.6
1,701,299	+		Pf6N2E2_1453	0.71	+0.8
1,701,299	+		Pf6N2E2_1453	0.71	+0.8