Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1341

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,576,231	+		Pf6N2E2_1339	0.87	-1.5
1,576,231	+		Pf6N2E2_1339	0.87	-1.5
1,576,267	+				-0.2
1,576,268	-				-1.5
1,576,268	-				+0.8
1,576,899	+		Pf6N2E2_1340	0.80	-1.3
1,576,900	-		Pf6N2E2_1340	0.80	+0.8
1,576,990	+				+0.8
1,577,199	+		Pf6N2E2_1341	0.40	+0.8
1,577,199	+		Pf6N2E2_1341	0.40	+0.8
1,577,199	+		Pf6N2E2_1341	0.40	-0.2
1,577,199	+		Pf6N2E2_1341	0.40	-0.2
1,577,200	-		Pf6N2E2_1341	0.40	-0.2
1,577,200	-		Pf6N2E2_1341	0.40	-3.2
1,577,200	-		Pf6N2E2_1341	0.40	+0.8
1,577,349	+				+0.8
1,577,349	+		Pf6N2E2_1341	0.79	-2.0
1,577,350	-		Pf6N2E2_1341	0.79	-0.8
1,577,350	-		Pf6N2E2_1341	0.79	+0.8
1,577,438	-				+0.8
1,577,546	+				+0.8
1,577,546	+				+0.8
1,577,546	+				+0.8
1,577,546	+				-2.5
1,577,547	-				+0.8
1,577,578	-				-2.3
1,577,578	-				+0.8
1,577,733	-		Pf6N2E2_1342	0.21	+0.8
1,577,885	+		Pf6N2E2_1342	0.32	-0.9
1,577,886	-		Pf6N2E2_1342	0.33	-1.2
1,577,916	-		Pf6N2E2_1342	0.35	-0.4
1,577,916	-		Pf6N2E2_1342	0.35	+0.8
1,578,042	+		Pf6N2E2_1342	0.44	-1.7
1,578,197	+		Pf6N2E2_1342	0.56	-0.2
1,578,197	+		Pf6N2E2_1342	0.56	+0.8
1,578,198	-		Pf6N2E2_1342	0.56	+0.8