Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1223

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
1,428,842	+		Pf6N2E2_1221	0.88	-0.2
1,428,842	+		Pf6N2E2_1221	0.88	+0.8
1,428,971	+				+0.8
1,428,971	+				+0.8
1,428,971	+				+0.8
1,428,972	-				-0.2
1,428,999	+				+0.8
1,429,173	-				+0.8
1,429,174	+				-1.9
1,429,175	-				+0.8
1,429,175	-				-2.9
1,429,175	-				-0.2
1,429,175	-				-0.8
1,429,183	+				-0.2
1,429,183	+				+0.8
1,429,226	+		Pf6N2E2_1222	0.15	+0.8
1,429,226	+		Pf6N2E2_1222	0.15	-1.2
1,429,226	+		Pf6N2E2_1222	0.15	+0.8
1,429,226	+		Pf6N2E2_1222	0.15	+0.8
1,429,226	+		Pf6N2E2_1222	0.15	-1.7
1,429,227	-		Pf6N2E2_1222	0.15	-0.8
1,429,227	-		Pf6N2E2_1222	0.15	-3.2
1,429,227	-		Pf6N2E2_1222	0.15	-1.5
1,429,304	-		Pf6N2E2_1222	0.29	-2.3
1,429,335	+		Pf6N2E2_1222	0.35	-1.6
1,429,534	+		Pf6N2E2_1222	0.72	-2.4
1,429,534	+		Pf6N2E2_1222	0.72	+0.8
1,429,534	+		Pf6N2E2_1222	0.72	-1.9
1,429,534	+		Pf6N2E2_1222	0.72	-0.2
1,429,534	+		Pf6N2E2_1222	0.72	-1.5
1,429,535	-		Pf6N2E2_1222	0.72	+0.8
1,429,535	-		Pf6N2E2_1222	0.72	+0.8
1,429,535	-		Pf6N2E2_1222	0.72	-1.4
1,429,672	-				+0.8
1,429,720	-				+0.8
1,429,809	-				-0.8
1,429,809	-				-1.6
1,429,809	-				+0.8
1,429,843	-				-0.2
1,429,946	+		Pf6N2E2_1223	0.48	+0.8
1,429,958	+		Pf6N2E2_1223	0.53	+0.8
1,429,958	+		Pf6N2E2_1223	0.53	-4.3
1,429,985	+		Pf6N2E2_1223	0.65	+0.8
1,430,183	-				-1.5
1,430,183	-				-2.3
1,430,282	-				-0.8
1,430,407	+		Pf6N2E2_1224	0.12	-0.2
1,430,613	-		Pf6N2E2_1224	0.22	+0.8
1,430,798	-		Pf6N2E2_1224	0.32	+0.8
1,430,989	-		Pf6N2E2_1224	0.42	-2.2
1,431,027	-		Pf6N2E2_1224	0.44	+0.8
1,431,061	+		Pf6N2E2_1224	0.46	-2.1