Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_92

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
136,865	-				-0.0
136,865	-				+1.0
136,866	+				+1.0
137,163	+		Pf6N2E2_91	0.43	+1.0
137,164	-		Pf6N2E2_91	0.43	+1.0
137,285	-		Pf6N2E2_91	0.57	-0.0
137,448	+		Pf6N2E2_91	0.75	+1.0
137,448	+		Pf6N2E2_91	0.75	-1.4
137,449	-		Pf6N2E2_91	0.75	+1.0
137,454	+		Pf6N2E2_91	0.76	-0.4
137,454	+		Pf6N2E2_91	0.76	+1.0
137,454	+		Pf6N2E2_91	0.76	-0.6
137,454	+		Pf6N2E2_91	0.76	+1.0
137,454	+		Pf6N2E2_91	0.76	-2.1
137,454	+		Pf6N2E2_91	0.76	+1.0
137,454	+		Pf6N2E2_91	0.76	-2.6
137,454	+		Pf6N2E2_91	0.76	-0.6
137,454	+		Pf6N2E2_91	0.76	-0.0
137,455	-		Pf6N2E2_91	0.76	+1.0
137,455	-		Pf6N2E2_91	0.76	+1.0
137,455	-		Pf6N2E2_91	0.76	-0.6
137,455	-		Pf6N2E2_91	0.76	-0.0
137,455	-		Pf6N2E2_91	0.76	-2.4
137,455	-		Pf6N2E2_91	0.76	-1.6
137,455	-		Pf6N2E2_91	0.76	-2.2
137,455	-		Pf6N2E2_91	0.76	+1.0
137,455	-		Pf6N2E2_91	0.76	-0.6
137,679	-				+1.0
137,703	+				+2.0
137,780	+				-1.6
137,780	+				+1.0
137,861	-		Pf6N2E2_92	0.20	+1.0
138,001	+		Pf6N2E2_92	0.51	+1.0
138,002	-		Pf6N2E2_92	0.51	+1.0
138,115	+		Pf6N2E2_92	0.76	-0.0
138,116	-		Pf6N2E2_92	0.76	+1.0
138,325	+				+1.0
138,575	+				+1.0
138,576	-				+1.0
138,576	-				-1.9
138,614	+				+1.0
138,614	+				-0.4
138,615	-				-3.1
138,679	-				+1.0
138,722	+				-1.0
138,722	+				-0.6
138,722	+				+1.0
138,722	+				+1.0
138,722	+				-0.0
138,722	+				-0.0
138,722	+				-1.0
138,722	+				-1.1
138,722	+				-3.3
138,722	+				+1.0
138,723	-				-0.0
138,723	-				-0.6
138,734	+				+1.0
138,734	+				+1.0
138,735	-				+1.0
138,847	+				+1.0
138,847	+				+1.0
138,847	+				-0.6
139,008	+		Pf6N2E2_93	0.14	+1.0
139,008	+		Pf6N2E2_93	0.14	-0.0
139,009	-		Pf6N2E2_93	0.14	+1.0
139,011	+		Pf6N2E2_93	0.14	+1.0
139,012	-		Pf6N2E2_93	0.14	-0.0
139,012	-		Pf6N2E2_93	0.14	+1.0
139,017	+		Pf6N2E2_93	0.16	+1.0
139,017	+		Pf6N2E2_93	0.16	+1.0
139,017	+		Pf6N2E2_93	0.16	-0.0
139,017	+		Pf6N2E2_93	0.16	+1.0
139,017	+		Pf6N2E2_93	0.16	+1.0
139,018	-		Pf6N2E2_93	0.16	-1.7
139,018	-		Pf6N2E2_93	0.16	+1.0
139,018	-		Pf6N2E2_93	0.16	+1.0
139,035	+		Pf6N2E2_93	0.20	-1.7
139,035	+		Pf6N2E2_93	0.20	-1.4
139,035	+		Pf6N2E2_93	0.20	+1.0
139,036	-		Pf6N2E2_93	0.20	+1.0
139,036	-		Pf6N2E2_93	0.20	-0.0
139,036	-		Pf6N2E2_93	0.20	-1.8
139,036	-		Pf6N2E2_93	0.20	+1.0
139,036	-		Pf6N2E2_93	0.20	+1.0
139,036	-		Pf6N2E2_93	0.20	+1.0
139,036	-		Pf6N2E2_93	0.20	+1.0
139,036	-		Pf6N2E2_93	0.20	+0.4
139,036	-		Pf6N2E2_93	0.20	-2.6
139,067	-		Pf6N2E2_93	0.27	-0.0
139,067	-		Pf6N2E2_93	0.27	+1.0
139,188	+		Pf6N2E2_93	0.55	-0.6
139,189	-		Pf6N2E2_93	0.56	-2.4
139,193	-		Pf6N2E2_93	0.57	+1.0
139,193	-		Pf6N2E2_93	0.57	+1.0