Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_755

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
863,679	+		Pf6N2E2_753	0.87	-1.7
863,679	+		Pf6N2E2_753	0.87	-2.4
863,679	+		Pf6N2E2_753	0.87	-2.2
863,680	-		Pf6N2E2_753	0.87	-0.2
863,680	-		Pf6N2E2_753	0.87	-1.4
863,733	+				-2.1
863,733	+				-1.0
863,733	+				-3.3
863,734	-				+0.8
863,734	-				-0.8
863,734	-				-0.8
863,734	-				+0.8
863,745	+				+0.8
863,828	-				+0.8
863,905	+				+0.8
863,905	+				+0.8
863,905	+				-0.5
863,919	+				-0.2
863,919	+				-0.2
863,919	+				+0.8
864,297	+		Pf6N2E2_754	0.84	+0.8
864,297	+		Pf6N2E2_754	0.84	+0.8
864,348	-				-1.8
864,604	+		Pf6N2E2_755	0.12	-0.8
864,688	+		Pf6N2E2_755	0.17	-0.8
864,688	+		Pf6N2E2_755	0.17	+0.8
864,688	+		Pf6N2E2_755	0.17	-2.9
864,688	+		Pf6N2E2_755	0.17	+0.8
864,689	-		Pf6N2E2_755	0.17	+0.8
864,689	-		Pf6N2E2_755	0.17	+0.8
864,689	-		Pf6N2E2_755	0.17	-0.8
864,776	-		Pf6N2E2_755	0.22	+0.8
864,776	-		Pf6N2E2_755	0.22	+0.8
864,776	-		Pf6N2E2_755	0.22	+0.8
864,776	-		Pf6N2E2_755	0.22	-2.3
864,776	-		Pf6N2E2_755	0.22	-0.2
864,844	+		Pf6N2E2_755	0.26	+0.8
864,844	+		Pf6N2E2_755	0.26	-2.7
864,845	-		Pf6N2E2_755	0.26	+0.8
864,862	+				-0.8
864,862	+		Pf6N2E2_755	0.27	-0.2
864,862	+		Pf6N2E2_755	0.27	-1.6
864,872	-		Pf6N2E2_755	0.27	+0.8
864,872	-		Pf6N2E2_755	0.27	-0.2
864,907	-		Pf6N2E2_755	0.29	+0.8
864,958	+		Pf6N2E2_755	0.32	-3.1
864,958	+		Pf6N2E2_755	0.32	-0.2
864,959	-		Pf6N2E2_755	0.32	-1.8
864,965	+		Pf6N2E2_755	0.33	-2.4
864,965	+		Pf6N2E2_755	0.33	-0.7
864,966	-		Pf6N2E2_755	0.33	-0.9
864,966	-		Pf6N2E2_755	0.33	-0.2
864,966	-		Pf6N2E2_755	0.33	-0.2
865,090	+		Pf6N2E2_755	0.40	-0.8
865,090	+		Pf6N2E2_755	0.40	+0.8
865,090	+		Pf6N2E2_755	0.40	-0.8
865,090	+		Pf6N2E2_755	0.40	+0.8
865,091	-		Pf6N2E2_755	0.40	-0.2
865,091	-		Pf6N2E2_755	0.40	+0.8
865,180	+		Pf6N2E2_755	0.45	-3.4
865,225	+		Pf6N2E2_755	0.47	-1.2
865,226	-		Pf6N2E2_755	0.48	+0.8
865,285	+		Pf6N2E2_755	0.51	-2.2
865,372	+		Pf6N2E2_755	0.56	+0.8
865,373	-		Pf6N2E2_755	0.56	-1.2
865,522	+		Pf6N2E2_755	0.65	+0.8
865,777	+		Pf6N2E2_755	0.79	-0.8
865,777	+		Pf6N2E2_755	0.79	-0.2
865,778	-		Pf6N2E2_755	0.79	-0.8
865,778	-		Pf6N2E2_755	0.79	-3.2
865,778	-		Pf6N2E2_755	0.79	-1.2
865,778	-		Pf6N2E2_755	0.79	+0.8
865,790	-		Pf6N2E2_755	0.80	-0.2
865,859	-		Pf6N2E2_755	0.84	-1.5
865,870	+		Pf6N2E2_755	0.85	+0.8
865,871	-		Pf6N2E2_755	0.85	-0.2
866,057	-				-2.9
866,211	+				-2.0
866,211	+				+0.8
866,211	+				-0.2
866,224	+				+0.8
866,224	+				+0.8
866,224	+				-0.8
866,224	+				-0.8
866,225	-				+0.8
866,228	-				-0.2
866,420	+				-0.8
866,421	-				+0.8
866,421	-				-0.8
866,453	+				+0.8
866,453	+				+0.8
866,454	-				+0.8
866,454	-				-0.2
866,593	+		Pf6N2E2_756	0.47	+0.8
866,593	+		Pf6N2E2_756	0.47	+0.8
866,594	-		Pf6N2E2_756	0.47	-2.5
866,594	-		Pf6N2E2_756	0.47	+0.8
866,615	-		Pf6N2E2_756	0.59	-1.6
866,645	+		Pf6N2E2_756	0.76	+0.8
866,646	-		Pf6N2E2_756	0.77	+0.8
866,646	-		Pf6N2E2_756	0.77	-1.2
866,646	-		Pf6N2E2_756	0.77	-0.2
866,646	-		Pf6N2E2_756	0.77	-0.5
866,706	+				+0.8
866,706	+				-1.9
866,707	-				+0.8
866,715	+				+0.8
866,715	+				+0.8
866,715	+				-0.2
866,715	+				+0.8
866,715	+				-0.8
866,715	+				-0.2
866,716	-				+0.8
866,716	-				+0.8
866,716	-				-1.2
866,717	+				+0.8
866,717	+				-1.5
866,717	+				-0.2
866,717	+				+0.8
866,718	-				-3.6
866,718	-				-0.2
866,718	-				+0.8
866,718	-				+0.8
866,718	-				+0.8
866,733	-				+1.1
866,733	-				-2.2
866,749	+				+0.8
866,750	-				-0.8
866,753	-				+0.8
866,863	-				+0.8
866,873	+				-0.8
866,873	+				+0.8
866,874	-				-0.2
866,910	-				+0.8
866,917	-				-0.6
866,929	+				-1.3
866,929	+				-0.4
866,930	-				+0.8
866,935	+				+0.8
866,935	+				+0.8
866,935	+				+0.8
866,935	+				+0.8
866,936	-				-2.8
866,936	-				-2.5
866,941	+				-0.2
866,944	+				+0.8
866,945	-				+0.8
867,044	+				+0.8
867,045	-				+0.8