Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5453

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
6,259,481	+		Pf6N2E2_5451	0.56	-0.5
6,259,481	+		Pf6N2E2_5451	0.56	-0.5
6,259,481	+		Pf6N2E2_5451	0.56	-0.5
6,259,482	-		Pf6N2E2_5451	0.56	+0.1
6,259,482	-		Pf6N2E2_5451	0.56	-0.9
6,259,482	-		Pf6N2E2_5451	0.56	+1.1
6,259,482	-		Pf6N2E2_5451	0.56	-0.9
6,259,482	-		Pf6N2E2_5451	0.56	+0.1
6,259,482	-		Pf6N2E2_5451	0.56	+1.1
6,259,482	-		Pf6N2E2_5451	0.56	-1.6
6,259,560	+		Pf6N2E2_5451	0.72	-2.1
6,259,561	-		Pf6N2E2_5451	0.72	+0.1
6,259,561	-		Pf6N2E2_5451	0.72	+0.1
6,259,561	-		Pf6N2E2_5451	0.72	-0.5
6,259,634	+		Pf6N2E2_5451	0.88	+1.1
6,259,635	-		Pf6N2E2_5451	0.88	-1.7
6,259,635	-		Pf6N2E2_5451	0.88	-1.7
6,259,635	-		Pf6N2E2_5451	0.88	+1.1
6,259,649	+				-0.5
6,259,649	+				+1.1
6,259,649	+				+1.1
6,259,650	-				-0.5
6,259,650	-				-1.2
6,259,691	+				+1.1
6,259,691	+				+1.1
6,259,692	-				-1.8
6,259,692	-				+1.1
6,259,710	+				+0.1
6,259,710	+				+1.1
6,259,711	-				-0.9
6,259,711	-				+1.1
6,259,711	-				+1.1
6,259,711	-				+0.1
6,259,712	+				-1.3
6,259,712	+				+0.1
6,259,713	-				-1.7
6,259,713	-				+1.1
6,259,713	-				+0.1
6,259,713	-				+1.1
6,259,713	-				+0.1
6,259,713	-				+1.1
6,259,752	+		Pf6N2E2_5452	0.24	+0.1
6,259,752	+		Pf6N2E2_5452	0.24	-0.3
6,259,753	-		Pf6N2E2_5452	0.25	+1.1
6,259,812	-		Pf6N2E2_5452	0.67	-2.2
6,259,878	-				-0.5
6,259,934	+				+1.1
6,259,934	+				+1.1
6,259,934	+				+1.1
6,259,936	+				+0.1
6,259,936	+				+1.1
6,259,937	-				-0.2
6,259,937	-				+0.1
6,259,937	-				+0.4
6,259,946	+				+0.1
6,259,947	-				+1.1
6,259,958	+				+1.1
6,260,023	+				+0.1
6,260,024	-				+0.1
6,260,057	+				-1.3
6,260,057	+				+0.1
6,260,058	-				+1.1
6,260,058	-				+1.1
6,260,058	-				+1.1
6,260,118	+				-0.5
6,260,119	-				+0.1
6,260,119	-				-1.7
6,260,188	+				+1.1
6,260,189	-				+1.1
6,260,189	-				+0.1
6,260,228	+				+1.1
6,260,229	-				+1.1
6,260,234	+				+0.1
6,260,234	+				-1.9
6,260,235	-				+0.1
6,260,235	-				+1.1
6,260,235	-				+0.1
6,260,271	+				+1.1
6,260,326	-				+1.1
6,260,326	-				-1.2
6,260,350	+				+1.1
6,260,351	-				+1.1
6,260,351	-				+1.1
6,260,351	-				+0.1
6,260,352	+				-0.5
6,260,352	+				+1.1
6,260,352	+				+0.1
6,260,352	+				+1.1
6,260,352	+				-1.5
6,260,352	+				+1.1
6,260,352	+				-1.9
6,260,352	+				+1.1
6,260,353	-				-1.9
6,260,353	-				-1.0
6,260,353	-				+1.1
6,260,353	-				+1.1
6,260,353	-				+1.1
6,260,353	-				+1.1
6,260,353	-				-0.5
6,260,353	-				-1.2
6,260,353	-				+0.1
6,260,353	-				+1.1
6,260,353	-				+0.1
6,260,353	-				+1.1
6,260,368	-				-1.1
6,260,378	+				-2.6
6,260,413	-				+0.1
6,260,430	+				+0.1
6,260,430	+				-0.5
6,260,430	+				+1.1
6,260,430	+				+1.1
6,260,431	-				+1.1
6,260,431	-				-0.5
6,260,431	-				-1.2
6,260,826	+		Pf6N2E2_5453	0.69	-0.5
6,260,827	-		Pf6N2E2_5453	0.69	+1.1
6,260,827	-		Pf6N2E2_5453	0.69	-1.2
6,260,868	+		Pf6N2E2_5453	0.76	-2.4
6,260,868	+		Pf6N2E2_5453	0.76	+0.1
6,260,869	-		Pf6N2E2_5453	0.77	-1.5
6,261,037	+				-1.1
6,261,038	-				+1.1
6,261,038	-				-1.8
6,261,060	-				+1.1
6,261,060	-				+1.1
6,261,170	-				+0.1
6,261,179	-				+0.1
6,261,182	+				-0.5
6,261,182	+				+0.1
6,261,182	+				+1.1
6,261,182	+				+1.1
6,261,182	+				+1.1
6,261,182	+				+0.1
6,261,182	+				+0.1
6,261,183	-				+1.1
6,261,183	-				-0.9
6,261,183	-				+1.1
6,261,183	-				-2.3
6,261,183	-				-3.3
6,261,183	-				-0.5
6,261,183	-				-0.5
6,261,183	-				-1.8
6,261,183	-				-1.0
6,261,183	-				-1.1
6,261,336	-				+1.1
6,261,336	-				-1.9
6,261,347	+				-0.5
6,261,348	-				-1.8
6,261,434	+				+0.1
6,261,434	+				-0.6
6,261,435	-				+0.1
6,261,458	+				-2.8
6,261,458	+				+1.1
6,261,459	-				+1.1
6,261,459	-				+1.1
6,261,459	-				-2.2
6,261,485	+				+1.1
6,261,486	-				-1.2
6,261,491	+				+0.1
6,261,503	+				+1.1
6,261,503	+				+1.1
6,261,503	+				+1.1
6,261,503	+				+0.1
6,261,503	+				+0.1
6,261,577	+				-1.9
6,261,578	-				-2.1
6,261,578	-				+0.1
6,261,578	-				-1.1
6,261,578	-				+0.1
6,261,578	-				+1.1
6,261,578	-				+1.1
6,261,578	-				-0.5
6,261,578	-				+1.1
6,261,599	+				-2.8
6,261,599	+				+0.1
6,261,599	+				+0.1
6,261,599	+				-0.9
6,261,599	+				+1.1
6,261,599	+				-0.5
6,261,600	-				-0.9
6,261,602	+				-2.1
6,261,603	-				+1.1
6,261,603	-				-0.7
6,261,603	-				-0.5
6,261,650	+				+1.1
6,261,650	+				+0.1
6,261,651	-				+0.1
6,261,651	-				-0.5
6,261,651	-				-0.5
6,261,651	-				+0.1
6,261,651	-				-1.2
6,261,709	+				-0.3
6,261,709	+				-0.9
6,261,709	+				+0.1
6,261,709	+				+1.1
6,261,709	+				-0.9
6,261,709	+				+1.1
6,261,709	+				+1.1
6,261,709	+				+1.1
6,261,709	+				+1.1
6,261,709	+				-3.4
6,261,710	-				+1.1
6,261,718	-				+1.1
6,261,718	-				-0.5
6,261,732	+				+1.1
6,261,733	-				+1.1
6,261,733	-				+1.1
6,261,773	+				+1.1
6,261,786	+				+1.1
6,261,786	+				-2.6
6,261,786	+				+1.1
6,261,787	-				+1.1
6,261,787	-				-1.3
6,261,787	-				-1.3
6,261,787	-				+0.5
6,261,787	-				-2.5
6,261,790	+				-2.2
6,261,790	+				+1.1
6,261,790	+				-1.5
6,261,791	-				-0.5
6,261,807	+				+1.1
6,261,808	-				+1.1
6,261,808	-				+1.1
6,261,814	-				+1.1
6,261,814	-				+1.1
6,261,829	-				+1.1
6,261,835	+				-0.5
6,261,835	+				+1.1
6,261,836	-				-0.5
6,261,836	-				+0.1
6,261,891	+				-1.6
6,261,891	+				-0.5
6,261,892	-				+1.1
6,261,892	-				-0.3
6,261,892	-				+1.1
6,261,892	-				-1.2
6,261,892	-				+1.1