Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5124

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
5,907,365	+		Pf6N2E2_5123	0.37	+0.1
5,907,365	+		Pf6N2E2_5123	0.37	+1.1
5,907,365	+		Pf6N2E2_5123	0.37	+0.1
5,907,366	-		Pf6N2E2_5123	0.37	+0.1
5,907,366	-		Pf6N2E2_5123	0.37	+0.1
5,907,497	+		Pf6N2E2_5123	0.45	+0.1
5,907,519	+		Pf6N2E2_5123	0.47	-1.4
5,907,519	+		Pf6N2E2_5123	0.47	+1.1
5,907,520	-		Pf6N2E2_5123	0.47	+1.1
5,907,642	+		Pf6N2E2_5123	0.54	+1.1
5,907,642	+		Pf6N2E2_5123	0.54	-0.5
5,907,642	+		Pf6N2E2_5123	0.54	-1.1
5,907,643	-		Pf6N2E2_5123	0.54	+1.1
5,907,674	+		Pf6N2E2_5123	0.56	+0.1
5,907,674	+		Pf6N2E2_5123	0.56	+0.1
5,907,674	+		Pf6N2E2_5123	0.56	-1.5
5,907,675	-		Pf6N2E2_5123	0.56	+0.1
5,907,675	-		Pf6N2E2_5123	0.56	+1.1
5,907,909	+		Pf6N2E2_5123	0.71	+1.1
5,907,909	+		Pf6N2E2_5123	0.71	+0.1
5,908,018	+		Pf6N2E2_5123	0.78	-1.4
5,908,191	+		Pf6N2E2_5123	0.89	+0.1
5,908,192	-		Pf6N2E2_5123	0.89	-0.7
5,908,192	-		Pf6N2E2_5123	0.89	+1.1
5,908,405	+		Pf6N2E2_5124	0.21	-3.1
5,908,405	+		Pf6N2E2_5124	0.21	-1.0
5,908,405	+		Pf6N2E2_5124	0.21	-2.1
5,908,405	+		Pf6N2E2_5124	0.21	+1.1
5,908,406	-		Pf6N2E2_5124	0.21	+1.1
5,908,406	-		Pf6N2E2_5124	0.21	-0.9
5,908,449	+		Pf6N2E2_5124	0.40	-0.5
5,908,449	+		Pf6N2E2_5124	0.40	-0.5
5,908,449	+		Pf6N2E2_5124	0.40	-1.2
5,908,450	-		Pf6N2E2_5124	0.40	+0.1
5,908,578	+				+0.1
5,908,579	-				+0.1
5,908,579	-				-2.0
5,908,579	-				+0.1
5,908,579	-				+1.1
5,908,655	+				-0.5
5,908,668	+				-1.8
5,908,668	+				-0.5
5,908,668	+				+0.1
5,908,668	+				+0.1
5,908,668	+				-1.4
5,908,669	-				+0.1
5,908,692	-				+1.1
5,908,705	+				+0.1
5,908,705	+				+1.1
5,908,706	-				+1.1
5,908,706	-				+1.1
5,908,723	+				-1.4
5,908,724	-				-0.5
5,908,803	+				-1.9
5,908,803	+				+1.1
5,908,803	+				+1.1
5,908,804	-				+0.1
5,908,804	-				-0.7
5,908,804	-				+1.1
5,908,804	-				-1.4
5,908,804	-				+1.1
5,908,836	+		Pf6N2E2_5125	0.10	+1.1
5,908,836	+		Pf6N2E2_5125	0.10	+0.1
5,908,836	+		Pf6N2E2_5125	0.10	+0.1
5,908,836	+		Pf6N2E2_5125	0.10	+0.1
5,908,837	-		Pf6N2E2_5125	0.10	+1.1
5,908,837	-		Pf6N2E2_5125	0.10	+0.1
5,908,880	-		Pf6N2E2_5125	0.13	-0.5
5,909,044	+		Pf6N2E2_5125	0.25	+1.1
5,909,044	+		Pf6N2E2_5125	0.25	-1.8
5,909,044	+		Pf6N2E2_5125	0.25	+1.1
5,909,045	-		Pf6N2E2_5125	0.25	-0.6
5,909,045	-		Pf6N2E2_5125	0.25	+0.1
5,909,045	-		Pf6N2E2_5125	0.25	+1.1
5,909,045	-		Pf6N2E2_5125	0.25	+0.1
5,909,045	-		Pf6N2E2_5125	0.25	+0.1
5,909,047	-		Pf6N2E2_5125	0.26	+1.1
5,909,047	-		Pf6N2E2_5125	0.26	+1.1
5,909,113	-		Pf6N2E2_5125	0.30	+1.1
5,909,113	-		Pf6N2E2_5125	0.30	+1.1
5,909,113	-		Pf6N2E2_5125	0.30	+0.1
5,909,313	+		Pf6N2E2_5125	0.45	+1.1
5,909,387	+		Pf6N2E2_5125	0.51	+1.1
5,909,586	+		Pf6N2E2_5125	0.65	-0.5