Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3701

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
4,315,185	+		Pf6N2E2_3700	0.16	+1.2
4,315,192	-		Pf6N2E2_3700	0.17	+1.2
4,315,192	-		Pf6N2E2_3700	0.17	-1.8
4,315,192	-		Pf6N2E2_3700	0.17	+0.2
4,315,192	-		Pf6N2E2_3700	0.17	+0.2
4,315,192	-		Pf6N2E2_3700	0.17	-1.6
4,315,245	+		Pf6N2E2_3700	0.21	-2.5
4,315,245	+		Pf6N2E2_3700	0.21	-0.4
4,315,245	+		Pf6N2E2_3700	0.21	-3.1
4,315,245	+		Pf6N2E2_3700	0.21	-2.0
4,315,245	+		Pf6N2E2_3700	0.21	-0.4
4,315,245	+		Pf6N2E2_3700	0.21	+0.2
4,315,245	+		Pf6N2E2_3700	0.21	-0.4
4,315,245	+		Pf6N2E2_3700	0.21	+0.2
4,315,246	-		Pf6N2E2_3700	0.21	+0.2
4,315,246	-		Pf6N2E2_3700	0.21	-3.2
4,315,246	-		Pf6N2E2_3700	0.21	+0.2
4,315,246	-		Pf6N2E2_3700	0.21	+0.2
4,315,246	-		Pf6N2E2_3700	0.21	-2.1
4,315,246	-		Pf6N2E2_3700	0.21	-0.8
4,315,246	-		Pf6N2E2_3700	0.21	-0.8
4,315,246	-		Pf6N2E2_3700	0.21	+0.2
4,315,246	-		Pf6N2E2_3700	0.21	-0.1
4,315,297	+		Pf6N2E2_3700	0.26	-2.4
4,315,297	+		Pf6N2E2_3700	0.26	-0.4
4,315,308	+		Pf6N2E2_3700	0.27	+1.2
4,315,308	+		Pf6N2E2_3700	0.27	-1.6
4,315,308	+		Pf6N2E2_3700	0.27	-0.8
4,315,547	+		Pf6N2E2_3700	0.47	+0.2
4,315,547	+		Pf6N2E2_3700	0.47	-2.4
4,315,547	+		Pf6N2E2_3700	0.47	+1.2
4,315,547	+		Pf6N2E2_3700	0.47	+1.2
4,315,548	-		Pf6N2E2_3700	0.47	-3.5
4,315,548	-		Pf6N2E2_3700	0.47	-1.3
4,315,548	-		Pf6N2E2_3700	0.47	-0.4
4,315,548	-		Pf6N2E2_3700	0.47	+0.2
4,315,548	-		Pf6N2E2_3700	0.47	-0.2
4,315,548	-		Pf6N2E2_3700	0.47	-0.8
4,315,803	+		Pf6N2E2_3700	0.68	+0.2
4,315,803	+		Pf6N2E2_3700	0.68	+1.2
4,315,803	+		Pf6N2E2_3700	0.68	-2.0
4,315,803	+		Pf6N2E2_3700	0.68	-1.6
4,315,804	-		Pf6N2E2_3700	0.68	-0.4
4,315,845	+		Pf6N2E2_3700	0.72	-0.4
4,315,845	+		Pf6N2E2_3700	0.72	+1.2
4,315,845	+		Pf6N2E2_3700	0.72	+0.2
4,315,846	-		Pf6N2E2_3700	0.72	-0.4
4,316,022	+		Pf6N2E2_3700	0.86	+0.2
4,316,023	-		Pf6N2E2_3700	0.86	+0.2
4,316,023	-		Pf6N2E2_3700	0.86	-4.1
4,316,023	-		Pf6N2E2_3700	0.86	+2.2
4,316,080	-				+0.2
4,316,274	+				+1.2
4,316,274	+				+0.2
4,316,274	+				-0.4
4,316,274	+				-0.8
4,316,274	+				-0.1
4,316,275	-				+0.2
4,316,279	-				-0.8
4,316,323	+		Pf6N2E2_3701	0.14	+1.2
4,316,431	+		Pf6N2E2_3701	0.24	+1.2
4,316,431	+		Pf6N2E2_3701	0.24	-0.8
4,316,431	+		Pf6N2E2_3701	0.24	+1.2
4,316,432	-		Pf6N2E2_3701	0.25	+1.2
4,316,432	-		Pf6N2E2_3701	0.25	-2.6
4,316,432	-		Pf6N2E2_3701	0.25	+1.2
4,316,602	+		Pf6N2E2_3701	0.41	+1.2
4,316,602	+		Pf6N2E2_3701	0.41	+0.2
4,316,602	+		Pf6N2E2_3701	0.41	+0.2
4,316,602	+		Pf6N2E2_3701	0.41	+1.2
4,316,602	+		Pf6N2E2_3701	0.41	+0.2
4,316,602	+		Pf6N2E2_3701	0.41	+1.2
4,316,603	-		Pf6N2E2_3701	0.42	+0.2
4,316,603	-		Pf6N2E2_3701	0.42	+0.2
4,316,769	+		Pf6N2E2_3701	0.58	-0.6
4,316,800	+		Pf6N2E2_3701	0.61	+0.2
4,317,325	+		Pf6N2E2_3702	0.46	-1.8
4,317,325	+		Pf6N2E2_3702	0.46	+1.2
4,317,325	+		Pf6N2E2_3702	0.46	+1.2
4,317,325	+		Pf6N2E2_3702	0.46	-1.2
4,317,465	+				-0.3
4,317,465	+				-2.2
4,317,465	+				+1.2
4,317,755	-		Pf6N2E2_3703	0.34	-1.4
4,317,865	+		Pf6N2E2_3703	0.49	+1.2
4,317,865	+		Pf6N2E2_3703	0.49	-0.4
4,317,865	+		Pf6N2E2_3703	0.49	+1.2
4,317,865	+		Pf6N2E2_3703	0.49	+1.2
4,317,865	+		Pf6N2E2_3703	0.49	+1.2
4,317,865	+		Pf6N2E2_3703	0.49	+1.2
4,317,865	+		Pf6N2E2_3703	0.49	+1.2
4,317,865	+		Pf6N2E2_3703	0.49	-0.4
4,317,865	+		Pf6N2E2_3703	0.49	-0.9
4,317,865	+		Pf6N2E2_3703	0.49	+0.2
4,317,865	+		Pf6N2E2_3703	0.49	-1.2
4,317,865	+		Pf6N2E2_3703	0.49	+1.2
4,317,866	-		Pf6N2E2_3703	0.49	-0.8
4,317,866	-		Pf6N2E2_3703	0.49	+1.2
4,317,866	-		Pf6N2E2_3703	0.49	-1.4
4,317,866	-		Pf6N2E2_3703	0.49	-0.8
4,317,866	-		Pf6N2E2_3703	0.49	+1.2
4,317,866	-		Pf6N2E2_3703	0.49	-1.6
4,317,866	-		Pf6N2E2_3703	0.49	+1.2
4,318,174	-		Pf6N2E2_3703	0.90	-1.6