Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3220

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
3,724,768	+				+1.1
3,724,861	+				+1.1
3,724,861	+				+1.1
3,724,862	-				+1.1
3,724,971	+				+1.1
3,725,096	-				+1.1
3,725,122	-				+0.1
3,725,164	+				+0.1
3,725,165	-				-0.8
3,725,165	-				-0.5
3,725,235	+				+1.1
3,725,235	+				+1.1
3,725,238	+				-2.1
3,725,238	+				+1.1
3,725,238	+				+0.1
3,725,238	+				+1.1
3,725,476	+		Pf6N2E2_3219	0.51	-1.5
3,725,476	+		Pf6N2E2_3219	0.51	+0.1
3,725,477	-		Pf6N2E2_3219	0.51	+1.1
3,725,477	-		Pf6N2E2_3219	0.51	+1.1
3,725,477	-		Pf6N2E2_3219	0.51	-1.2
3,725,673	+				-1.9
3,725,791	+				+1.1
3,725,791	+				+1.1
3,725,792	-				+1.1
3,725,795	-				+1.1
3,725,795	-				-1.7
3,725,795	-				+1.1
3,725,911	+		Pf6N2E2_3220	0.13	+1.1
3,726,127	+		Pf6N2E2_3220	0.27	-1.9
3,726,128	-		Pf6N2E2_3220	0.28	-1.5
3,726,142	+		Pf6N2E2_3220	0.28	+1.1
3,726,142	+		Pf6N2E2_3220	0.28	+1.1
3,726,142	+		Pf6N2E2_3220	0.28	+1.1
3,726,142	+		Pf6N2E2_3220	0.28	+0.1
3,726,142	+		Pf6N2E2_3220	0.28	-2.2
3,726,143	-		Pf6N2E2_3220	0.28	-0.5
3,726,143	-		Pf6N2E2_3220	0.28	+0.1
3,726,143	-		Pf6N2E2_3220	0.28	-1.7
3,726,143	-		Pf6N2E2_3220	0.28	-0.9
3,726,143	-		Pf6N2E2_3220	0.28	+1.1
3,726,143	-		Pf6N2E2_3220	0.28	+1.1
3,726,143	-		Pf6N2E2_3220	0.28	-1.6
3,726,154	+		Pf6N2E2_3220	0.29	-1.8
3,726,154	+		Pf6N2E2_3220	0.29	+1.1
3,726,154	+		Pf6N2E2_3220	0.29	+1.1
3,726,155	-		Pf6N2E2_3220	0.29	-1.2
3,726,155	-		Pf6N2E2_3220	0.29	-0.5
3,726,160	+		Pf6N2E2_3220	0.30	+1.1
3,726,227	-		Pf6N2E2_3220	0.34	+1.1
3,726,359	-		Pf6N2E2_3220	0.43	+0.1
3,726,495	+		Pf6N2E2_3220	0.52	+0.1
3,726,499	+		Pf6N2E2_3220	0.52	-1.7
3,726,500	-		Pf6N2E2_3220	0.52	+0.1
3,726,500	-		Pf6N2E2_3220	0.52	+1.1
3,726,703	+		Pf6N2E2_3220	0.66	+0.1
3,726,704	-		Pf6N2E2_3220	0.66	+0.1
3,726,704	-		Pf6N2E2_3220	0.66	+0.1
3,726,704	-		Pf6N2E2_3220	0.66	+0.1
3,726,705	+		Pf6N2E2_3220	0.66	+1.1
3,726,705	+		Pf6N2E2_3220	0.66	-1.5
3,726,706	-		Pf6N2E2_3220	0.66	+0.1
3,726,706	-		Pf6N2E2_3220	0.66	+0.1
3,726,727	+		Pf6N2E2_3220	0.67	+0.1
3,726,881	+		Pf6N2E2_3220	0.77	-3.0
3,726,882	-		Pf6N2E2_3220	0.77	-1.5
3,726,927	+		Pf6N2E2_3220	0.80	+1.1
3,726,927	+		Pf6N2E2_3220	0.80	+1.1
3,726,927	+		Pf6N2E2_3220	0.80	-0.5
3,726,928	-		Pf6N2E2_3220	0.81	+0.1
3,726,928	-		Pf6N2E2_3220	0.81	-0.5
3,727,005	+		Pf6N2E2_3220	0.86	-3.1
3,727,005	+		Pf6N2E2_3220	0.86	-1.5
3,727,006	-		Pf6N2E2_3220	0.86	+0.1
3,727,006	-		Pf6N2E2_3220	0.86	+0.1
3,727,080	+				-1.7
3,727,081	-				-0.1
3,727,130	-				+1.1
3,727,314	+				-0.5
3,727,315	-				-1.7
3,727,469	+				+0.1
3,727,470	-				+1.1
3,727,470	-				-1.0
3,727,491	-		Pf6N2E2_3221	0.11	+1.1
3,727,718	+		Pf6N2E2_3221	0.53	-0.5
3,727,718	+		Pf6N2E2_3221	0.53	+1.1
3,727,719	-		Pf6N2E2_3221	0.53	-0.9
3,728,027	+				+1.1
3,728,027	+				-2.7
3,728,031	+				-1.2
3,728,031	+				-0.5
3,728,031	+				+0.1
3,728,031	+				+1.1
3,728,031	+				-1.7
3,728,032	-				+0.1
3,728,032	-				+1.1
3,728,032	-				-0.5
3,728,036	+				-2.0
3,728,043	-				+1.1
3,728,125	-				+0.1