Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3033

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
3,516,482	-				-0.5
3,516,503	+				+0.1
3,516,504	-				-2.1
3,516,541	+				+0.1
3,516,542	-				+0.5
3,516,644	+		Pf6N2E2_3032	0.28	-1.1
3,516,644	+		Pf6N2E2_3032	0.28	+1.1
3,516,645	-		Pf6N2E2_3032	0.28	+1.1
3,516,647	+		Pf6N2E2_3032	0.29	+1.1
3,516,647	+		Pf6N2E2_3032	0.29	+1.1
3,516,647	+		Pf6N2E2_3032	0.29	-2.0
3,516,647	+		Pf6N2E2_3032	0.29	+1.1
3,516,648	-		Pf6N2E2_3032	0.29	-0.5
3,516,648	-		Pf6N2E2_3032	0.29	-1.1
3,516,648	-		Pf6N2E2_3032	0.29	+1.1
3,516,817	+		Pf6N2E2_3032	0.77	+0.1
3,516,817	+		Pf6N2E2_3032	0.77	-1.2
3,516,817	+		Pf6N2E2_3032	0.77	+1.1
3,516,818	-		Pf6N2E2_3032	0.77	-0.5
3,516,818	-		Pf6N2E2_3032	0.77	+0.1
3,516,818	-		Pf6N2E2_3032	0.77	-1.3
3,516,896	+				-0.5
3,516,896	+				+1.1
3,516,897	-				-1.0
3,516,921	+				-1.7
3,516,921	+				-1.3
3,516,922	-				-0.5
3,516,922	-				+1.1
3,517,049	+				+1.1
3,517,050	-				+0.1
3,517,173	-				+0.1
3,517,173	-				+0.1
3,517,173	-				-0.9
3,517,173	-				-0.5
3,517,243	-				-1.7
3,517,281	-				-1.9
3,517,284	-				-0.5
3,517,284	-				+0.1
3,517,284	-				-1.3
3,517,320	+				+1.1
3,517,320	+				+1.1
3,517,320	+				+0.1
3,517,324	+				-0.5
3,517,324	+				+0.1
3,517,324	+				-0.9
3,517,324	+				+1.1
3,517,324	+				+0.1
3,517,324	+				+0.1
3,517,481	+				-0.5
3,517,586	-		Pf6N2E2_3033	0.62	+0.1
3,517,586	-		Pf6N2E2_3033	0.62	-2.3
3,517,636	+				-1.4
3,517,683	+				+0.1
3,517,684	-				-1.5
3,517,842	+				+1.1
3,517,842	+				+1.1
3,517,843	-				-2.8
3,517,843	-				+1.1
3,517,843	-				-0.5
3,517,843	-				+1.1
3,517,843	-				+1.1
3,517,932	-				+1.1
3,517,932	-				+0.1
3,517,992	+		Pf6N2E2_3034	0.20	+0.3
3,517,992	+		Pf6N2E2_3034	0.20	+1.1
3,517,992	+		Pf6N2E2_3034	0.20	+0.1
3,517,992	+		Pf6N2E2_3034	0.20	+1.1
3,517,992	+		Pf6N2E2_3034	0.20	+1.1
3,517,992	+		Pf6N2E2_3034	0.20	+0.1
3,517,993	-		Pf6N2E2_3034	0.21	+1.1
3,517,993	-		Pf6N2E2_3034	0.21	+0.1
3,517,993	-		Pf6N2E2_3034	0.21	+1.1
3,517,993	-		Pf6N2E2_3034	0.21	-0.5
3,517,993	-		Pf6N2E2_3034	0.21	+0.9
3,517,996	+		Pf6N2E2_3034	0.22	+0.1
3,517,996	+		Pf6N2E2_3034	0.22	+1.1
3,517,997	-		Pf6N2E2_3034	0.23	+1.1
3,517,997	-		Pf6N2E2_3034	0.23	-1.7
3,518,018	+		Pf6N2E2_3034	0.37	+1.1
3,518,116	+				-0.5
3,518,116	+				-1.1
3,518,116	+				-0.5
3,518,150	-				+1.1
3,518,195	+				+0.5
3,518,196	-				+0.1
3,518,196	-				+0.1
3,518,256	-				-0.5
3,518,256	-				-2.1
3,518,256	-				+1.1
3,518,267	+				-2.2
3,518,268	-				-1.1
3,518,268	-				+1.1
3,518,363	+				+1.1
3,518,364	-				-0.5
3,518,382	-				-1.0
3,518,498	-		Pf6N2E2_3035	0.14	-1.4