Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2482

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
2,926,864	+		Pf6N2E2_2480	0.68	-0.0
2,926,864	+		Pf6N2E2_2480	0.68	+1.0
2,926,973	+				+1.0
2,926,973	+				-1.5
2,926,973	+				+1.0
2,926,973	+				+1.0
2,926,973	+				-2.3
2,926,973	+				+1.0
2,926,973	+				-0.6
2,926,973	+				-1.8
2,926,974	-				+1.0
2,926,974	-				-0.0
2,926,974	-				-0.0
2,926,974	-				-0.0
2,927,107	+				-2.7
2,927,107	+				+1.0
2,927,130	+				+1.0
2,927,130	+				-0.0
2,927,130	+				+1.0
2,927,131	-				-0.0
2,927,131	-				-1.9
2,927,162	+				-0.0
2,927,162	+				+1.0
2,927,214	-				-0.6
2,927,305	-		Pf6N2E2_2481	0.14	-0.0
2,927,337	-		Pf6N2E2_2481	0.21	+1.0
2,927,599	+		Pf6N2E2_2481	0.81	+1.0
2,927,599	+		Pf6N2E2_2481	0.81	-0.0
2,927,599	+		Pf6N2E2_2481	0.81	+1.0
2,927,600	-		Pf6N2E2_2481	0.82	-2.0
2,927,600	-		Pf6N2E2_2481	0.82	-2.8
2,927,661	+				+1.0
2,927,662	-				+1.0
2,927,662	-				+1.0
2,927,694	-				+1.0
2,927,847	+				-0.6
2,927,847	+				-0.0
2,927,847	+				+1.0
2,927,848	-				+1.0
2,927,848	-				-2.5
2,927,848	-				-0.0
2,927,848	-				+1.0
2,927,848	-				-1.2
2,927,850	+				+1.0
2,927,851	-				-0.0
2,927,851	-				-0.6
2,927,854	+				-2.2
2,927,854	+				+1.0
2,927,854	+				-0.0
2,927,854	+				-0.0
2,927,855	-				-1.8
2,927,855	-				-0.6
2,927,855	-				-1.4
2,927,863	+				-1.5
2,927,863	+				-0.3
2,927,863	+				-1.3
2,927,864	-				-0.3
2,927,864	-				+1.0
2,927,866	+				-0.6
2,927,866	+				+1.0
2,927,867	-				-1.8
2,927,871	+				-1.4
2,927,871	+				-0.3
2,927,871	+				-0.0
2,927,872	-				-0.6
2,927,872	-				+1.0
2,927,872	-				-0.7
2,927,872	-				-0.0
2,927,872	-				+1.0
2,927,972	-		Pf6N2E2_2482	0.14	-0.9
2,927,972	-		Pf6N2E2_2482	0.14	-1.2
2,928,000	+		Pf6N2E2_2482	0.15	-0.0
2,928,001	-		Pf6N2E2_2482	0.16	-0.4
2,928,081	+		Pf6N2E2_2482	0.21	-0.0
2,928,081	+		Pf6N2E2_2482	0.21	+1.0
2,928,081	+		Pf6N2E2_2482	0.21	+1.0
2,928,082	-		Pf6N2E2_2482	0.21	+1.0
2,928,082	-		Pf6N2E2_2482	0.21	-1.2
2,928,082	-		Pf6N2E2_2482	0.21	-1.3
2,928,082	-		Pf6N2E2_2482	0.21	-0.0
2,928,082	-		Pf6N2E2_2482	0.21	+1.0
2,928,199	+		Pf6N2E2_2482	0.29	+1.0
2,928,200	-		Pf6N2E2_2482	0.30	+1.0
2,928,342	+		Pf6N2E2_2482	0.40	-0.0
2,928,342	+		Pf6N2E2_2482	0.40	+1.0
2,928,343	-		Pf6N2E2_2482	0.40	+1.0
2,928,343	-		Pf6N2E2_2482	0.40	-0.6
2,928,354	+		Pf6N2E2_2482	0.40	+1.0
2,928,354	+		Pf6N2E2_2482	0.40	-1.0
2,928,394	+		Pf6N2E2_2482	0.43	+1.0
2,928,395	-		Pf6N2E2_2482	0.43	+1.0
2,928,395	-		Pf6N2E2_2482	0.43	-1.3
2,928,396	+		Pf6N2E2_2482	0.43	-0.3
2,928,396	+		Pf6N2E2_2482	0.43	-1.0
2,928,396	+		Pf6N2E2_2482	0.43	+1.0
2,928,396	+				-1.5
2,928,396	+		Pf6N2E2_2482	0.43	-0.0
2,928,396	+		Pf6N2E2_2482	0.43	+1.0
2,928,396	+		Pf6N2E2_2482	0.43	-1.3
2,928,396	+		Pf6N2E2_2482	0.43	-0.0
2,928,396	+		Pf6N2E2_2482	0.43	-1.3
2,928,396	+		Pf6N2E2_2482	0.43	+0.7
2,928,396	+		Pf6N2E2_2482	0.43	-1.4
2,928,396	+		Pf6N2E2_2482	0.43	-0.0
2,928,397	-		Pf6N2E2_2482	0.43	+1.0
2,928,397	-		Pf6N2E2_2482	0.43	+1.0
2,928,397	-		Pf6N2E2_2482	0.43	+1.0
2,928,397	-		Pf6N2E2_2482	0.43	+1.0
2,928,459	+		Pf6N2E2_2482	0.48	-0.0
2,928,460	-		Pf6N2E2_2482	0.48	-0.0
2,928,599	+		Pf6N2E2_2482	0.58	+1.0
2,928,599	+		Pf6N2E2_2482	0.58	-1.9
2,928,600	-		Pf6N2E2_2482	0.58	+1.0
2,928,747	+		Pf6N2E2_2482	0.68	-0.6
2,928,748	-		Pf6N2E2_2482	0.68	-0.6
2,928,793	+		Pf6N2E2_2482	0.71	+1.0
2,928,881	+		Pf6N2E2_2482	0.77	+1.0
2,928,882	-		Pf6N2E2_2482	0.77	-1.0
2,928,963	+		Pf6N2E2_2482	0.83	+1.0
2,928,964	-		Pf6N2E2_2482	0.83	+1.0
2,928,964	-		Pf6N2E2_2482	0.83	-1.1
2,928,964	-		Pf6N2E2_2482	0.83	-1.0
2,928,964	-		Pf6N2E2_2482	0.83	+1.0
2,928,990	+		Pf6N2E2_2482	0.85	-2.0
2,929,178	+				+1.0
2,929,178	+				+1.0
2,929,179	-				+1.0
2,929,179	-				+0.2
2,929,179	-				-3.0
2,929,219	+				-1.7
2,929,220	-				+1.0
2,929,319	-				+1.0
2,929,321	-				+1.0
2,929,369	+				-0.0
2,929,370	-				+2.0
2,929,370	-				-0.0
2,929,386	+				+1.0
2,929,389	-				-0.0
2,929,394	+				-1.5
2,929,394	+				-0.2
2,929,395	-				-2.2
2,929,405	+				+1.0
2,929,432	-				-0.6
2,929,516	+				-0.0
2,929,946	-		Pf6N2E2_2483	0.63	-0.6
2,930,129	-		Pf6N2E2_2483	0.85	+1.0
2,930,153	+		Pf6N2E2_2483	0.88	-0.0
2,930,154	-		Pf6N2E2_2483	0.88	-0.0
2,930,154	-		Pf6N2E2_2483	0.88	-0.9