Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2190

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
2,593,896	+		Pf6N2E2_2189	0.70	+1.0
2,593,896	+		Pf6N2E2_2189	0.70	+1.0
2,593,896	+		Pf6N2E2_2189	0.70	+1.0
2,593,897	-		Pf6N2E2_2189	0.70	-0.0
2,593,986	+		Pf6N2E2_2189	0.80	+1.0
2,594,031	+		Pf6N2E2_2189	0.85	+1.0
2,594,031	+		Pf6N2E2_2189	0.85	+1.0
2,594,032	-		Pf6N2E2_2189	0.85	-0.0
2,594,032	-		Pf6N2E2_2189	0.85	+1.0
2,594,032	-		Pf6N2E2_2189	0.85	+1.0
2,594,032	-		Pf6N2E2_2189	0.85	+1.0
2,594,032	-		Pf6N2E2_2189	0.85	+1.0
2,594,201	-				-3.2
2,594,302	+				-1.8
2,594,302	+				+1.0
2,594,303	-				-1.2
2,594,305	-				-1.5
2,594,402	+				-0.6
2,594,402	+				-1.8
2,594,403	-				+1.0
2,594,403	-				-0.6
2,594,433	+				-0.6
2,594,433	+				+1.0
2,594,475	+				-1.6
2,594,475	+				-0.0
2,594,475	+				-0.0
2,594,475	+				-0.9
2,594,475	+				+1.0
2,594,475	+				-0.1
2,594,475	+				+1.0
2,594,475	+				+1.0
2,594,475	+				+1.0
2,594,476	-				-1.1
2,594,481	+				+1.0
2,594,491	+				-0.0
2,594,491	+				+1.0
2,594,491	+				+1.0
2,594,547	+				-1.0
2,594,665	-				-0.9
2,594,759	+				-2.0
2,594,759	+				+1.0
2,594,759	+				+1.0
2,594,759	+				-0.0
2,594,760	-				-1.0
2,594,760	-				+1.0
2,594,760	-				-2.6
2,594,760	-				+1.0
2,594,760	-				+1.0
2,594,760	-				-1.8
2,594,760	-				-2.5
2,594,760	-				+1.0
2,594,760	-				+1.0
2,594,760	-				-1.7
2,595,031	-		Pf6N2E2_2190	0.13	+1.0
2,595,115	+		Pf6N2E2_2190	0.18	-1.6
2,595,115	+		Pf6N2E2_2190	0.18	+1.0
2,595,115	+		Pf6N2E2_2190	0.18	-2.1
2,595,116	-		Pf6N2E2_2190	0.18	-1.9
2,595,116	-		Pf6N2E2_2190	0.18	-0.0
2,595,116	-		Pf6N2E2_2190	0.18	-0.0
2,595,168	+		Pf6N2E2_2190	0.21	-0.6
2,595,168	+		Pf6N2E2_2190	0.21	-0.0
2,595,169	-		Pf6N2E2_2190	0.21	-1.7
2,595,286	+		Pf6N2E2_2190	0.28	-1.9
2,595,287	-		Pf6N2E2_2190	0.28	-0.3
2,595,287	-		Pf6N2E2_2190	0.28	+1.0
2,595,290	+		Pf6N2E2_2190	0.28	+1.0
2,595,290	+		Pf6N2E2_2190	0.28	-2.2
2,595,290	+		Pf6N2E2_2190	0.28	-1.0
2,595,290	+		Pf6N2E2_2190	0.28	+1.0
2,595,290	+		Pf6N2E2_2190	0.28	-0.0
2,595,290	+		Pf6N2E2_2190	0.28	+1.0
2,595,290	+		Pf6N2E2_2190	0.28	+1.0
2,595,290	+		Pf6N2E2_2190	0.28	-0.0
2,595,291	-		Pf6N2E2_2190	0.28	-0.0
2,595,291	-		Pf6N2E2_2190	0.28	+1.0
2,595,291	-		Pf6N2E2_2190	0.28	+1.0
2,595,291	-		Pf6N2E2_2190	0.28	-1.0
2,595,291	-		Pf6N2E2_2190	0.28	-2.2
2,595,291	-		Pf6N2E2_2190	0.28	-0.0
2,595,291	-		Pf6N2E2_2190	0.28	+1.0
2,595,291	-		Pf6N2E2_2190	0.28	+1.0
2,595,291	-		Pf6N2E2_2190	0.28	-0.0
2,595,291	-		Pf6N2E2_2190	0.28	-0.0
2,595,291	-		Pf6N2E2_2190	0.28	-3.0
2,595,291	-		Pf6N2E2_2190	0.28	+1.0
2,595,291	-		Pf6N2E2_2190	0.28	-0.0
2,595,291	-		Pf6N2E2_2190	0.28	-0.0
2,595,291	-		Pf6N2E2_2190	0.28	+1.0
2,595,337	+		Pf6N2E2_2190	0.31	+1.0
2,595,337	+		Pf6N2E2_2190	0.31	+1.0
2,595,609	+		Pf6N2E2_2190	0.47	+1.0
2,595,609	+		Pf6N2E2_2190	0.47	+1.0
2,595,609	+		Pf6N2E2_2190	0.47	+1.0
2,595,609	+		Pf6N2E2_2190	0.47	+1.0
2,595,610	-		Pf6N2E2_2190	0.47	-0.0
2,595,610	-		Pf6N2E2_2190	0.47	-1.3
2,595,610	-		Pf6N2E2_2190	0.47	-0.0
2,595,610	-		Pf6N2E2_2190	0.47	-1.0
2,595,610	-		Pf6N2E2_2190	0.47	-0.0
2,595,610	-		Pf6N2E2_2190	0.47	-0.7
2,595,610	-		Pf6N2E2_2190	0.47	-1.6
2,595,610	-		Pf6N2E2_2190	0.47	-1.8
2,595,610	-		Pf6N2E2_2190	0.47	+1.0
2,595,610	-		Pf6N2E2_2190	0.47	+1.0
2,595,678	+		Pf6N2E2_2190	0.51	-1.3
2,595,678	+		Pf6N2E2_2190	0.51	-1.6
2,595,679	-		Pf6N2E2_2190	0.51	-0.0
2,595,741	+		Pf6N2E2_2190	0.54	+0.2
2,595,741	+		Pf6N2E2_2190	0.54	-2.6
2,595,804	+		Pf6N2E2_2190	0.58	+1.0
2,595,804	+		Pf6N2E2_2190	0.58	-2.0
2,595,805	-		Pf6N2E2_2190	0.58	-0.0
2,595,821	-		Pf6N2E2_2190	0.59	+1.0
2,595,873	+		Pf6N2E2_2190	0.62	+1.0
2,595,873	+		Pf6N2E2_2190	0.62	-2.5
2,595,874	-		Pf6N2E2_2190	0.62	+1.0
2,595,874	-		Pf6N2E2_2190	0.62	-0.3
2,595,874	-		Pf6N2E2_2190	0.62	+1.0
2,596,164	+		Pf6N2E2_2190	0.79	+1.0
2,596,165	-		Pf6N2E2_2190	0.79	+1.0
2,596,165	-		Pf6N2E2_2190	0.79	-1.0
2,596,165	-		Pf6N2E2_2190	0.79	+1.0
2,596,185	+		Pf6N2E2_2190	0.81	+1.0
2,596,302	-		Pf6N2E2_2190	0.88	+1.0
2,596,302	-		Pf6N2E2_2190	0.88	+1.0
2,596,357	+				+1.0
2,596,358	-				-0.0
2,596,358	-				+1.0
2,596,358	-				+1.0
2,596,358	-				-1.0
2,596,358	-				+1.0
2,596,358	-				+1.0
2,596,359	+				-1.5
2,596,479	+				-1.7
2,596,479	+				+1.0
2,596,480	-				+1.0
2,596,480	-				-0.6
2,596,532	+				+1.0
2,596,533	-				-1.5
2,596,533	-				+0.4
2,596,536	-				-0.0
2,596,545	-				-0.0
2,596,584	+				+0.6
2,596,584	+				-0.8
2,596,585	-				+1.0
2,596,585	-				-0.0
2,596,585	-				-1.0
2,596,585	-				+1.0
2,596,585	-				+1.0
2,596,611	-				-1.6
2,596,611	-				-1.3
2,596,611	-				-2.3
2,596,611	-				-1.8
2,596,643	+				+1.0
2,596,653	+				+1.0
2,596,654	-				+0.6
2,596,901	+		Pf6N2E2_2191	0.16	-1.6
2,596,922	+		Pf6N2E2_2191	0.18	-1.8
2,596,923	-		Pf6N2E2_2191	0.18	-0.0
2,596,986	-		Pf6N2E2_2191	0.24	+1.0
2,596,986	-		Pf6N2E2_2191	0.24	+1.0
2,597,054	+		Pf6N2E2_2191	0.29	+1.0
2,597,055	-		Pf6N2E2_2191	0.29	+0.3
2,597,168	+		Pf6N2E2_2191	0.39	+1.0
2,597,168	+		Pf6N2E2_2191	0.39	+1.0
2,597,168	+		Pf6N2E2_2191	0.39	+1.0
2,597,169	-		Pf6N2E2_2191	0.39	-1.4
2,597,169	-		Pf6N2E2_2191	0.39	+1.0
2,597,169	-		Pf6N2E2_2191	0.39	-0.6
2,597,169	-		Pf6N2E2_2191	0.39	-0.6
2,597,169	-		Pf6N2E2_2191	0.39	-0.0
2,597,222	+		Pf6N2E2_2191	0.44	+1.0
2,597,222	+		Pf6N2E2_2191	0.44	-2.5
2,597,223	-		Pf6N2E2_2191	0.44	-0.0
2,597,223	-		Pf6N2E2_2191	0.44	+1.0
2,597,232	-		Pf6N2E2_2191	0.45	+1.0
2,597,232	-		Pf6N2E2_2191	0.45	-1.3
2,597,317	+		Pf6N2E2_2191	0.52	-1.6
2,597,318	-		Pf6N2E2_2191	0.52	-1.2
2,597,318	-		Pf6N2E2_2191	0.52	-0.0