Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1858

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
2,202,160	-				-1.7
2,202,283	+				+0.8
2,202,370	-				-0.2
2,202,405	+				+0.8
2,202,593	-		Pf6N2E2_1857	0.17	-0.8
2,202,593	-		Pf6N2E2_1857	0.17	-1.7
2,202,593	-		Pf6N2E2_1857	0.17	+0.8
2,202,593	-		Pf6N2E2_1857	0.17	-1.2
2,202,705	+		Pf6N2E2_1857	0.40	-0.8
2,202,705	+		Pf6N2E2_1857	0.40	+0.8
2,202,705	+		Pf6N2E2_1857	0.40	+0.8
2,202,706	-		Pf6N2E2_1857	0.40	-0.2
2,202,816	+		Pf6N2E2_1857	0.63	+0.8
2,202,826	-		Pf6N2E2_1857	0.65	-0.2
2,202,833	+		Pf6N2E2_1857	0.67	-0.8
2,202,916	-		Pf6N2E2_1857	0.84	+0.2
2,203,236	-		Pf6N2E2_1858	0.39	-0.2
2,203,236	-		Pf6N2E2_1858	0.39	-0.2
2,203,317	-		Pf6N2E2_1858	0.52	+1.8
2,203,392	+		Pf6N2E2_1858	0.64	+0.8
2,203,392	+		Pf6N2E2_1858	0.64	-0.2
2,203,392	+		Pf6N2E2_1858	0.64	+0.8
2,203,398	+		Pf6N2E2_1858	0.64	-2.1
2,203,398	+		Pf6N2E2_1858	0.64	+0.8
2,203,398	+		Pf6N2E2_1858	0.64	+0.8
2,203,398	+		Pf6N2E2_1858	0.64	+0.8
2,203,399	-		Pf6N2E2_1858	0.65	+0.8
2,203,399	-		Pf6N2E2_1858	0.65	+0.8
2,203,399	-		Pf6N2E2_1858	0.65	+0.8
2,203,399	-		Pf6N2E2_1858	0.65	+0.8
2,203,399	-		Pf6N2E2_1858	0.65	+0.8
2,203,448	+		Pf6N2E2_1858	0.72	+0.8
2,203,449	-		Pf6N2E2_1858	0.72	-0.2
2,203,449	-		Pf6N2E2_1858	0.72	-0.8
2,203,469	+		Pf6N2E2_1858	0.76	+0.8
2,203,469	+		Pf6N2E2_1858	0.76	+0.8
2,203,500	+		Pf6N2E2_1858	0.81	+0.8
2,203,500	+		Pf6N2E2_1858	0.81	-0.2
2,203,500	+		Pf6N2E2_1858	0.81	+0.8
2,203,500	+		Pf6N2E2_1858	0.81	+0.8
2,203,501	-		Pf6N2E2_1858	0.81	+0.8
2,203,501	-		Pf6N2E2_1858	0.81	-0.2
2,203,501	-		Pf6N2E2_1858	0.81	-0.6
2,203,555	+		Pf6N2E2_1858	0.89	-0.2
2,203,556	-		Pf6N2E2_1858	0.89	+0.8
2,203,564	-				-2.2
2,203,591	+				+0.8
2,203,592	-				-2.1
2,203,592	-				+0.8
2,203,669	+		Pf6N2E2_1859	0.18	-1.9
2,203,672	+		Pf6N2E2_1859	0.19	-1.4
2,203,777	-		Pf6N2E2_1859	0.58	+0.8
2,203,779	+		Pf6N2E2_1859	0.58	+0.8
2,203,779	+		Pf6N2E2_1859	0.58	+0.8
2,203,780	-		Pf6N2E2_1859	0.59	+0.8
2,203,882	-				+0.8
2,203,882	-				-2.8
2,203,882	-				+0.8
2,203,890	+				-1.0
2,203,891	-				-1.5
2,203,891	-				+0.8
2,203,945	+				-0.2
2,203,945	+				+0.8
2,203,992	-				-1.0
2,204,174	+		Pf6N2E2_1860	0.52	+0.8
2,204,174	+		Pf6N2E2_1860	0.52	+0.8
2,204,174	+		Pf6N2E2_1860	0.52	-2.5
2,204,174	+		Pf6N2E2_1860	0.52	+0.8
2,204,175	-		Pf6N2E2_1860	0.52	+1.4
2,204,175	-		Pf6N2E2_1860	0.52	-1.3
2,204,328	+				+0.8
2,204,329	-				+0.8
2,204,334	+				+0.8
2,204,334	+				+0.8
2,204,335	-				+0.8
2,204,341	+				-0.2
2,204,342	-				+0.8
2,204,342	-				-0.8
2,204,342	-				-0.2
2,204,342	-				-0.8
2,204,342	-				+0.8
2,204,379	-				-1.9
2,204,395	+				+0.8
2,204,396	-				-0.8
2,204,396	-				+0.8
2,204,545	+		Pf6N2E2_1861	0.15	-0.8
2,204,545	+		Pf6N2E2_1861	0.15	+0.8
2,204,572	-		Pf6N2E2_1861	0.17	+0.8