Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1648

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,952,832	-				-0.8
1,952,869	+				+10.3
1,952,919	+				+0.7
1,952,970	+		Pf6N2E2_1647	0.12	+0.7
1,952,971	-		Pf6N2E2_1647	0.12	+11.1
1,953,080	+		Pf6N2E2_1647	0.23	+9.8
1,953,081	-		Pf6N2E2_1647	0.23	+11.1
1,953,081	-		Pf6N2E2_1647	0.23	-0.3
1,953,503	+		Pf6N2E2_1647	0.67	+0.7
1,953,638	+		Pf6N2E2_1647	0.81	+0.7
1,953,638	+		Pf6N2E2_1647	0.81	+0.7
1,953,638	+		Pf6N2E2_1647	0.81	-0.8
1,953,683	+		Pf6N2E2_1647	0.86	+10.7
1,953,684	-		Pf6N2E2_1647	0.86	+10.0
1,953,780	-				+0.7
1,953,889	+				+0.7
1,953,907	+		Pf6N2E2_1648	0.11	-1.3
1,953,908	-		Pf6N2E2_1648	0.11	-0.3
1,953,910	+		Pf6N2E2_1648	0.11	+10.1
1,953,910	+		Pf6N2E2_1648	0.11	+0.7
1,953,961	+		Pf6N2E2_1648	0.17	-0.8
1,953,991	+		Pf6N2E2_1648	0.21	-0.3
1,954,099	+		Pf6N2E2_1648	0.33	+9.9
1,954,225	+		Pf6N2E2_1648	0.48	+0.7
1,954,649	+				+0.7
1,954,941	-		Pf6N2E2_1649	0.22	+6.6
1,954,949	+		Pf6N2E2_1649	0.22	+0.7
1,955,255	+		Pf6N2E2_1649	0.49	-0.8
1,955,255	+		Pf6N2E2_1649	0.49	+0.7
1,955,255	+		Pf6N2E2_1649	0.49	+0.7
1,955,256	-		Pf6N2E2_1649	0.49	+0.7
1,955,355	-		Pf6N2E2_1649	0.57	+6.8
1,955,355	-		Pf6N2E2_1649	0.57	-0.3
1,955,613	-		Pf6N2E2_1649	0.80	+0.7