Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1566

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,827,784	+		Pf6N2E2_1565	0.20	+1.3
1,828,034	-		Pf6N2E2_1565	0.48	+0.7
1,828,150	+		Pf6N2E2_1565	0.61	+0.7
1,828,150	+		Pf6N2E2_1565	0.61	+0.7
1,828,150	+		Pf6N2E2_1565	0.61	-2.8
1,828,151	-		Pf6N2E2_1565	0.61	-0.3
1,828,169	-		Pf6N2E2_1565	0.63	-0.3
1,828,169	-		Pf6N2E2_1565	0.63	-0.8
1,828,252	+		Pf6N2E2_1565	0.72	+0.7
1,828,252	+		Pf6N2E2_1565	0.72	+0.7
1,828,252	+		Pf6N2E2_1565	0.72	+0.7
1,828,253	-		Pf6N2E2_1565	0.72	-0.7
1,828,253	-		Pf6N2E2_1565	0.72	-1.8
1,828,315	+		Pf6N2E2_1565	0.79	-2.1
1,828,316	-		Pf6N2E2_1565	0.79	+0.7
1,828,363	-		Pf6N2E2_1565	0.85	-1.3
1,828,363	-		Pf6N2E2_1565	0.85	-0.3
1,828,442	+				+0.7
1,828,442	+				+0.7
1,828,512	-				-1.3
1,828,816	+		Pf6N2E2_1566	0.41	-1.6
1,828,816	+		Pf6N2E2_1566	0.41	-1.6
1,828,816	+		Pf6N2E2_1566	0.41	-1.8
1,828,817	-		Pf6N2E2_1566	0.41	-3.2
1,829,038	+		Pf6N2E2_1566	0.70	+0.7
1,829,038	+		Pf6N2E2_1566	0.70	-2.8
1,829,225	-				-2.1
1,829,319	+				-0.3
1,829,457	+		Pf6N2E2_1567	0.17	-0.3
1,829,457	+		Pf6N2E2_1567	0.17	-0.3
1,829,457	+		Pf6N2E2_1567	0.17	+0.7
1,829,457	+		Pf6N2E2_1567	0.17	+0.7
1,829,743	+		Pf6N2E2_1567	0.49	-2.1
1,829,743	+		Pf6N2E2_1567	0.49	+0.7
1,829,743	+		Pf6N2E2_1567	0.49	-1.7
1,829,744	-		Pf6N2E2_1567	0.49	-0.8
1,829,744	-		Pf6N2E2_1567	0.49	-1.6
1,829,744	-		Pf6N2E2_1567	0.49	-0.8
1,830,231	-				-0.3