Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1428

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,676,260	+		Pf6N2E2_1427	0.46	-1.2
1,676,261	-		Pf6N2E2_1427	0.46	+0.8
1,676,440	+		Pf6N2E2_1427	0.60	-2.2
1,676,440	+		Pf6N2E2_1427	0.60	+0.8
1,676,440	+		Pf6N2E2_1427	0.60	+0.8
1,676,441	-		Pf6N2E2_1427	0.60	-0.2
1,676,441	-		Pf6N2E2_1427	0.60	+0.8
1,677,202	+				+0.8
1,677,255	+				+0.8
1,677,430	-		Pf6N2E2_1428	0.17	+0.8
1,677,430	-		Pf6N2E2_1428	0.17	-1.2
1,677,430	-		Pf6N2E2_1428	0.17	-1.8
1,677,430	-		Pf6N2E2_1428	0.17	-2.1
1,677,708	+		Pf6N2E2_1428	0.42	-0.2
1,677,708	+		Pf6N2E2_1428	0.42	-2.4
1,677,709	-		Pf6N2E2_1428	0.42	+0.8
1,677,709	-		Pf6N2E2_1428	0.42	+0.8
1,677,709	-		Pf6N2E2_1428	0.42	-1.7
1,677,709	-		Pf6N2E2_1428	0.42	+0.8
1,677,732	+		Pf6N2E2_1428	0.44	-1.8
1,677,732	+		Pf6N2E2_1428	0.44	+0.8
1,677,732	+		Pf6N2E2_1428	0.44	+0.8
1,677,733	-		Pf6N2E2_1428	0.44	-1.2
1,677,733	-		Pf6N2E2_1428	0.44	+0.8
1,677,733	-		Pf6N2E2_1428	0.44	-1.6
1,677,780	-		Pf6N2E2_1428	0.48	+0.8
1,677,780	-		Pf6N2E2_1428	0.48	+0.8
1,677,853	-		Pf6N2E2_1428	0.55	-1.2
1,677,873	-		Pf6N2E2_1428	0.57	+0.8
1,678,152	-		Pf6N2E2_1428	0.82	-1.8
1,678,152	-		Pf6N2E2_1428	0.82	-2.4
1,678,176	+		Pf6N2E2_1428	0.84	-1.9
1,678,177	-		Pf6N2E2_1428	0.84	+0.8
1,678,395	+				-0.2
1,678,440	+				+0.8
1,678,441	-				-0.7
1,678,441	-				-1.5
1,678,441	-				+0.8
1,678,588	+		Pf6N2E2_1429	0.14	-1.0
1,678,588	+		Pf6N2E2_1429	0.14	+0.8
1,678,588	+		Pf6N2E2_1429	0.14	-2.0
1,678,588	+		Pf6N2E2_1429	0.14	-0.2
1,678,589	-		Pf6N2E2_1429	0.14	+0.8
1,678,589	-		Pf6N2E2_1429	0.14	+0.8
1,678,589	-		Pf6N2E2_1429	0.14	-1.5
1,678,589	-		Pf6N2E2_1429	0.14	+0.8
1,678,589	-		Pf6N2E2_1429	0.14	-0.8
1,678,589	-		Pf6N2E2_1429	0.14	-0.8
1,679,106	-		Pf6N2E2_1429	0.82	-0.7
1,679,195	-				-0.2
1,679,263	+				-1.8